Shewanella sp. MR-7: Shewmr7_3621
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Entry
Shewmr7_3621 CDS
T00389
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00020
Citrate cycle (TCA cycle)
shm00190
Oxidative phosphorylation
shm00620
Pyruvate metabolism
shm00650
Butanoate metabolism
shm01100
Metabolic pathways
shm01110
Biosynthesis of secondary metabolites
shm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shewmr7_3621
00620 Pyruvate metabolism
Shewmr7_3621
00650 Butanoate metabolism
Shewmr7_3621
09102 Energy metabolism
00190 Oxidative phosphorylation
Shewmr7_3621
Enzymes [BR:
shm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Shewmr7_3621
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
Shewmr7_3621
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
FAD_oxidored
GIDA
Pyr_redox_2
DAO
NAD_binding_8
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABI44601
UniProt:
Q0HQK4
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Position
complement(4300970..4302976)
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AA seq
668 aa
AA seq
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MKLIYTDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVK
GMGDDEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWTRVTAGPREVIVN
AQKVTLQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISLDIPVHERVE
ALAIIHDGQRCHGVIARCLITGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIGQALA
LETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELAS
RDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVQEICENFLGIDPAKD
WIPVRPTQHYSMGGIRTKATGESPQLKGLFSVGEAACWDMHGFNRLGGNSLAETVVGGMI
IGKYVADFCENNSLEIDTQLAEKFMRQVQTEIDTLVDGEGHESPFELKREMQRIMMDYVG
IFRNGPELDKAVTELKVLLERSRKLGVKCKKRHANPELVEALRVKRMLKVALTVACGAAA
RTESRGAHAREDYPQRNDRDWLNRTLASWPDAEALAPVLSYEPLDVMKMELPPGYRGYGI
DNAIVHPDTAKREQQIAEILAGLGDDADRYQRQTALMPFELPPSLQAKNERLSDTLQRPS
ANALGEKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgatttataccgattcattagtggttggtgccggattggctggcctgagggtg
gccattgcctctaaagagcgcgggttagataccttagtgctatcacttatccccgccaaa
cgttctcactccgctgcagcgcaggggggaatgcaggccagtcttggcaatgccgtcaaa
ggcatgggcgatgatgaagacgtgcattttcaagatacggtgaaaggatcggactggggc
tgcgatcaagaagtcgccagaatgtttgcccattgtgcacctaaggcggtgcgtgaatta
gccaactggggcgtgccttggacacgtgtgactgcaggcccaagggaagtgattgttaac
gcccaaaaagtcacattgcaggaagccgaagaagcccacggtctgatcaatgctcgcgac
tttggcggcactaaaaagtggcgcacctgctataccgccgacggtacaggtcactcctta
ctctatgccatggataacaaagcgatttcgttggatattcctgttcacgagcgcgttgaa
gcactggcgataatccacgatggtcaacgctgtcacggagtgattgcccgctgtttaatc
acgggcgagctgcgtgcctatgtggctaaatcgaccacgatcgccaccggtggctatggc
cgtatttatgaagtctcaaccaatgcgattatctgcgagggtataggtcaggcgctggcg
ctcgaaacgggggtcgcgacccttggcaacatggaagcggtacagttccacccaacggca
attgtgcccgtggggattttaaccacagaaggttgccgcggtgatggtggcttgctgcgg
gataaggacggttaccgttttatgccggactatgagccagagaagaaagaactggcgtcg
cgggacgtggtgtctcgccgcatgaccgaacatatgcgtaaaggtaagggcgtcgatagt
ccctatggcccacatttatggctcgatatcaccctgcttgggcgcaagcatatcgaaacc
aacctgcgtgaagtgcaggagatttgcgaaaacttcctcggtatcgatcccgcgaaggat
tggatccccgttcgtccaactcagcactattccatgggcgggatccgcactaaggcaacg
ggcgagagtccgcagcttaagggcttattcagcgtgggtgaggcggcctgttgggatatg
catggctttaaccgattgggcggcaactcgctcgccgaaactgtggttggcggcatgatt
atcggcaaatatgtggctgatttttgtgagaataacagtcttgaaatcgacactcagctt
gccgaaaagtttatgcggcaggtacagactgaaattgacaccttagtcgatggtgaaggt
catgaaagtccctttgaacttaagcgcgaaatgcagcggattatgatggattacgtgggg
attttccgtaatggcccagaactcgataaggcggtgacagagctaaaggtgctgcttgaa
cgctcacgtaagctcggagttaagtgtaagaaacgccatgccaatcctgagctagtagaa
gcactaagggtaaagcggatgcttaaggtggcgttaacggtggcctgtggcgcagcagcg
cgtaccgagagccgtggtgcccacgcccgtgaggattatccgcagcgtaatgacagagac
tggctcaaccgtactctcgcaagttggcccgatgccgaggcgttggcccccgttttaagc
tacgagccgctggatgtgatgaagatggagttgccgccgggataccggggttacggtatc
gataatgccattgttcaccctgataccgctaaacgcgagcagcaaattgccgagattttg
gccgggctgggtgatgatgctgaccgttaccagcgccaaacggcgctgatgcccttcgag
ctgccgcctagcctgcaagcaaaaaatgaacgtttaagtgataccttacaaagaccatct
gccaatgcgctaggagaaaaatcataa
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