Shewanella sp. ANA-3: Shewana3_2524
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Entry
Shewana3_2524 CDS
T00428
Name
(GenBank) type III restriction enzyme, res subunit
KO
K19789
DNA repair protein RadD
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_2524
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Shewana3_2524
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
Helicase_C_2
AAA
AAA_22
AAA_16
zf-ribbon_3
SLFN-g3_helicase
zf-tcix
DZR
DUF2987
UPF0547
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ABK48753
UniProt:
A0KY84
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Position
3021537..3023309
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AA seq
590 aa
AA seq
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MSVNSNPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLV
LTHVKELVAQNAQKVGLLTTEASIYSAGLNQKSTDGKTVVASVQSAARALNQFDEPFSLV
IIDECHRVSLEKTSQYQQILSHLQQRNPKLRLLGLTATPYRLGTGWIYKRHYHGKVGSPE
LGIFEQCIFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNGEYPEAQVNALLNHA
GRATTAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDE
LIKRFKARELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICESKKDC
LVIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCQFANIFWGLTDNDGDIIEHFGRRC
QGIVEHHGQKQQCDFRFRSKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHH
LFRCQHMTLLDDAGDLKVQYLDIEGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPK
QYKNVSELIADSTAFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKHI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagttaattccaacccaagcgttaccctcagggattaccagcaacaagccgtcgat
gccgccatcgcgcatttcaaaaaaagcaccgattccgccgtattagtcctaccaacggga
gccgggaaaagtatcgttattgccgagctggcccgcatcgccagaggacgagtgcttgtt
ttaacccatgtgaaggaactggttgcccaaaacgcgcaaaaggtggggttactgacgact
gaagccagcatttactccgcagggttaaatcaaaaatcgactgacggcaaaaccgtcgtg
gccagtgtccaatccgccgcgcgcgcattaaatcaattcgatgagcccttctcgctagtg
attatcgatgagtgccacagagtcagcctcgaaaaaaccagtcaatatcagcaaatctta
agtcatttacagcagcgtaatcccaagctgaggttattaggcctaacggccactccctat
cggctcggtacgggctggatttacaaacgccattaccatggcaaagttggctcgcctgaa
cttgggatcttcgagcagtgtattttcgagcttcccatccgtccgctgattaaacaaggt
tatttaaccgcgcccaccttgttcgatggtttaagcgctcaatatgacttcagccaaatc
aagcccaatgacaatggcgaatatcccgaggcccaagtcaatgcactgctgaatcacgcc
gggcgcgcgacaacggcgattgtgaagcaactgattgaactgagtcaccaccgccagggg
atcattatttttgcggcgacagtgcgccatgctgaggaaattgtcagccagctcaataag
gagcacagcgagcaaacggcaatcgtcacggcacaaacgccagataatgagcgtgatgag
cttatcaagcgctttaaagcgagggagcttaagttcctcgtcaacgtggcggtattgacc
acgggattcgatgcgccccatgtggatttaattgcgattttacgccccaccgcatcggtg
agtttgtttcagcaaatgattggccgcggtcttaggatctgtgaaagtaaaaaagattgt
ttagtgattgattacgcagccaatggctatgatttgtattttccagaagtcggtcaagct
aagcccaatagcaagtcggttccggtacaagtgcactgccctgtctgccagtttgccaat
atcttttggggattaaccgacaatgatggcgatattatcgaacactttggccgtcgctgt
cagggcatagtcgagcatcatgggcaaaagcagcaatgtgactttcgatttagatctaaa
tcctgtcccgattgtggacaagagaacgacattgcagcgcgtatttgccagcattgccaa
tcaaccttaatcgaccccgacaaacgccttaagcaagtattgaataagcagcaccatcat
ctgttccgctgccaacatatgacgttattagatgatgcgggcgatcttaaggtgcaatat
ctggacattgaaggaaacgagtttaatcgacgctttaaactgcaaacgccagcccaatgg
cgtgccttgtatgcgctgtttatttttccccatagtcgcacgccgggcctaaaacctaag
caatacaaaaacgtgtctgagctgattgccgatagtaccgcctttcgaatgccagatctg
ttactgctcaaaaagcacaaaaaaggctgggatctgctcgaaagctatttcgattaccaa
gggcgctatcaaactgaaaataaacacatctga
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