Shewanella alkalitolerans: K0J45_02805
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Entry
K0J45_02805 CDS
T09228
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shns02000
]
K0J45_02805
Transporters [BR:
shns02000
]
Other transporters
Pores ion channels [TC:
1
]
K0J45_02805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
QYJ98196
LinkDB
All DBs
Position
complement(622706..625888)
Genome browser
AA seq
1060 aa
AA seq
DB search
MSRILLIILCLISFSGAANSPLNLNKRLGLGQEPQVASKSTAEQLSLLEEQLTEQQALQS
SFDAIIHQYQSQKQALTQQLKEAATPLEYNPNQDLSQQASLSYLRLSELKETEANLATQV
NELIKRQQQLPSLISQANLTLAKHKQATSDDNQPLSEMQRRVYVQSLSTLESELASSQKQ
IALTQQQLALVRSQLVQQEALIERLNGAIAEQRHKATAATIAASQIETSITDDAIAIKLN
AQNQAYGEQLKQLTHEVTNVMTLQEQAETQYQFQAKQITNIQQQIALVKLNSAFGERFLR
ILYSLPKPPSQDKISNEIANARLARYQIEQDQTLHPLLGAVEQLTPLQSKLVGAQKELQR
QLLENYDLYLGELAELRVLYEQLGQQYQTLKTTLNEHLFWVANANSIDGYWLGDLYQSTQ
WLLTQAPWHQVQDSLSEQSTLWSWWVILMVLCLVMQDLVTPKFTQLMAKNVTYVGNVTQD
KFIYSFNTLIGSLLYSCIKPLPLISGGLIFYFSNHNLVSSVGMGILAIGMLYQLYRLTYL
LALDKGLLIGHFKGDKAIIRAGQQRLRALTVLAMPIVGVIGFTEVLETSLVRNSLGRGAF
ILLALMLFWFYRDMLSLSKQEHHYHQDDKNKRLLQKLLWSILILLPPACAVLAFRGYYFT
AYQMLLQLQLSLILSLSFMLLYQLIKRWMLIERRRIAFNRAKAKRAEILAQREKEDDPNS
NEPPDTYEEPVVDLETISSQSLGLVRSLLTLAFLISLIGLWTQTHSAIFSFLDGITLWTS
SSTVDGIAQQIPITLKSLLLGLIIVGFSLMIATNLPGLLELMILQRLDLTQGTGFAITTV
SRYLVVFFGMLSGFSTLGMEWSKLQWLVAALSVGLGFGLQEIFANFISGLIILFEKPVRI
GDTVTIRELTGTVSKIQIRATTIVDWDRKEIIVPNKAFITEQLINWSLSDPITRVIVYVS
VARDSDPARVEAALYQAVKECDDALTTPEPEVWFAGFGQHTQDYEIRAYAKDMNTRWPLR
HKLHKQVSKKLRENHLELAYPQLEVHISGQSKETQGIIRS
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtatattactgattattctctgtctaatctcattctcaggcgccgcaaattcg
cccctgaatctcaataaacgcctgggattaggacaggagcctcaggtcgccagcaagagc
accgccgagcagttgagtctgctggaggagcagctcaccgagcaacaggccctgcagtcc
agcttcgacgccatcattcaccagtatcagagccagaaacaggccctgacacaacagctt
aaagaagccgccacgccgctggaatacaaccccaatcaagatcttagccagcaggcgtca
ctctcctacctgagactgtctgaactcaaagagacagaggctaacctagccactcaggtc
aacgagttgatcaaacgccagcaacagctacctagcctgatcagccaggccaacctgacc
ctggccaagcacaaacaggcgaccagcgacgacaatcagcccctgagcgagatgcaacgc
cgggtctatgttcagagcctgtcgaccctggagtctgagctggccagcagccagaaacag
atcgccctcacccagcagcagttggcgctggtgcgcagccaactggtgcagcaagaagcc
cttatcgaacgcctcaacggcgccatcgccgagcagcgtcacaaggcgacggcggccacc
atcgccgccagtcagatagaaacctccatcacagacgacgccatcgccatcaagctgaac
gcgcagaaccaagcctacggcgagcaactgaaacagctgacccatgaggtcaccaatgtg
atgacactacaggagcaggccgagacccaataccagttccaggccaagcagatcaccaac
attcagcagcagatcgccctggtgaagcttaactcggccttcggcgagcgcttcctgcgt
atcctctactcactgcccaagccgccgagccaggacaagatcagtaatgagatcgccaat
gcccgtctggcccgctaccagatagagcaagaccagacactgcatccactgctcggcgcc
gtcgagcagctcacgccgctgcagagcaagctggtcggagcccagaaagagctgcagcgt
cagctgctggaaaactatgatctctaccttggtgagctcgccgaattaagggtgctgtat
gagcagctgggccagcagtatcagacccttaagaccacgctcaacgagcacctgttttgg
gtagccaacgccaacagcatagacggctactggctgggcgacctgtatcagagtacccaa
tggctgctgacccaggcgccttggcatcaggtacaggactcactaagcgaacagagcacc
ctctggtcctggtgggtgatcttgatggtgctctgtctggtgatgcaggacctggtcacg
cctaaatttactcagctgatggccaagaacgtcacctatgtaggtaacgtcacgcaagat
aagtttatctatagtttcaataccttgattggctcgctgctctatagctgcatcaagcca
ctgccgctgatcagcggcggtctgatcttctacttcagcaaccataacctggtctcctcg
gtgggcatgggcatactggccataggcatgctgtaccagctctatcgcctcacctatctg
ctggcgctggataagggcctgttgatcggccacttcaagggcgacaaggcgatcatacgc
gccggtcagcaacgcctacgcgccctgaccgtactggcgatgccgattgtcggcgtgatc
ggcttcaccgaggtgctagagacttcgctggtgcgcaatagcctgggacgaggcgccttc
atcctgctggccctcatgctgttctggttctaccgcgacatgctgagcctgtcgaagcag
gaacatcactaccaccaggacgataagaataagcggctgctgcagaagctgctctggtcg
atactcatactgctgccgccggcctgcgccgtgctggccttcaggggctactacttcacc
gcctatcagatgctattgcagctacagctgtcgttgatcttatccctaagcttcatgctg
ctgtaccagttgattaaacgttggatgctgatcgagcgccgccgtatcgccttcaaccgc
gccaaggccaaacgcgccgagatcttggcccagcgggagaaagaagatgaccccaacagt
aacgagccgccggacacctatgaagagcctgtggtggatctcgagaccatctccagccag
tcacttgggctggtgcgttcacttctaacgctggccttcctgataagcctgataggcctc
tggactcagacccatagcgccatcttctcgtttttggacggcattactctgtggaccagc
tcgagcacggtcgacggtatcgcccagcagatccctatcaccctcaagtccctgctactg
ggacttatcatcgtcggcttctcgctgatgatagccaccaacctgccgggcctgctggag
ctgatgattctgcaacgattggatctcacccagggcacgggcttcgccatcaccactgtg
agtcgctatctggtggtcttcttcggtatgctcagcggcttttcgaccctggggatggag
tggtctaagctgcaatggctggtcgcggcgctctcggtgggcttgggttttggtctgcag
gagatcttcgccaacttcatctcgggactgatcatcttgttcgagaaaccggtgcgcatc
ggtgataccgtcaccatacgcgagctaacgggtacagtaagtaagatccagatccgcgcc
accacgattgtcgattgggacagaaaagagataatcgtccccaacaaggccttcatcacc
gagcagctgatcaactggtcgctgtcagaccctatcactagggtgatcgtctatgtctcg
gtcgccagggactcggatcccgcacgggtcgaggcggcgctctatcaggcggttaaggag
tgtgacgatgccctgaccacgccggagcccgaggtctggtttgccggatttggtcagcat
acccaggattatgagatccgcgcctatgccaaggatatgaacactcgctggccgctacga
cacaagctgcacaagcaggtcagcaagaaactgagagagaatcatctggagctcgcctat
ccgcagctcgaggtgcatattagtggtcaaagtaaagagactcaggggataattagaagc
taa
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