Shewanella alkalitolerans: K0J45_05835
Help
Entry
K0J45_05835 CDS
T09228
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shns
Shewanella alkalitolerans
Pathway
shns01501
beta-Lactam resistance
shns01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0J45_05835
01503 Cationic antimicrobial peptide (CAMP) resistance
K0J45_05835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shns02000
]
K0J45_05835
01504 Antimicrobial resistance genes [BR:
shns01504
]
K0J45_05835
Transporters [BR:
shns02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0J45_05835
Antimicrobial resistance genes [BR:
shns01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0J45_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QYJ98758
LinkDB
All DBs
Position
1305202..1308324
Genome browser
AA seq
1040 aa
AA seq
DB search
MISEFFIHRPKFAFVISTVLTLVGLISIPILSVAEFPEIAPPQVSVSTSYSGASADIVKD
TIAQPIEAEVNGVEGMLYMQSKSANDGSYSLNVTFDVGTDADMAQVKVQNRVQQAMPRLP
EEVKRQGVKVEKQSPNILMVVNLVSPNETFDSLFITNYAGLNVKDALARQNGVSKVQVIG
ALDYAIRIWLDPNQMASFGVTASDVIAALREQNIQVAAGRIGAAPVDPQQQFQYTLQTKG
RLKDPEEFGRVMIRANPDGSKVIVSDVARVELGSQTYDAQGKLNNKPSAIIAIYQAPDAN
ALEVAKAIKAEMDTLASRFPDDLEYKVLYDTTEFVETSITEVVQTLFISVALVVFVVYIF
LQDARSTLVPGIAIPVSLIGTFAFLLAFGMSINTVSLFALILAIGIVVDDAIVVVENVTR
LMEDEGLSPTEATSKAMKEVTGPVIATTLVLLAVFAPTAVMPGITGQMYAQFSVTICISV
LISSVNALTLSPALCASLLKPPKKHTHGFHYLFNTYFERFTGGYMKLVSSLVRKLVLVGV
AYACLIGVTGGIAKVLPSGFVPMEDKKAFMVDIQLPDGASLNRTEEVMRNLVKLTLEEPG
VENVIHASGFSILTGSVSSNGGLMIVTLSTWEERDSPDMVEAAIVAKLQAKYAANPSVKA
MAFSLPPIPGVGSVGGFEFVLQDTQGRSPQELASVMRALIMKANGQPEIAMAFSNFRADV
PQMYVDVDRDKAKALGISLNEIFSTMQTMLGSMYVNDFNRFGKVFRVILQAEGEFRNSDK
DIASFYVRSASGEMVPLSTLVKVTPILGPDVMNAYNMFSSTTINGFPAPGFSSGDAIAAM
ERAAQETLPAGYKFEWTGQTYQEIKAGNLAPLIFALALVFTYLFLVAQYESWSIPFAVML
AVPIAILGAFLNILLVGSELNLYAQIGLVLLIGLACKNAILIVEFAKQLREEGKSVLDAA
ETAARLRFRAVLMTAFSFLLGVLPLVIATGAGAGSRRALGYSVFGGMMAATLVGTLLVPV
FYVIMQKLRERMKGEGATSQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtgagttttttattcataggccgaaatttgccttcgtgatctcaaccgtgctg
accctggtgggcttgatctccatccccatcttgtcggtggccgagtttcccgaaattgcg
ccgcctcaggtgagcgtcagcaccagctattccggggccagcgccgacatagtcaaagac
accatagcccagcccatagaggcggaggtcaacggcgtcgaggggatgctctacatgcag
tccaagagcgccaacgacggcagctactccctcaacgtcaccttcgatgtgggcacagac
gccgacatggcccaggtgaaggtgcaaaaccgggtgcagcaggcgatgcccagactgccc
gaggaggtgaaacgccaaggggtgaaggttgagaagcagagccccaacatcctcatggtg
gtaaacctggttagccccaacgagaccttcgattcgctgtttattaccaactatgccggc
ctaaacgtcaaagacgccctggcgcggcagaatggggtatctaaggtgcaggtgatcggc
gccctggattacgccattcgtatctggctagatcccaatcagatggccagctttggcgtg
accgccagcgatgtgatcgccgccctgagagagcagaatattcaggtggccgccggtcgt
atcggcgccgcgcccgtggatccccagcagcaatttcaatataccctgcagaccaaggga
cgtctgaaagaccccgaggaatttggccgggtgatgatccgtgccaatcccgatggctct
aaggtgatcgtctcagatgtcgcccgggtcgagctgggctctcagacctatgacgcccag
ggtaagctgaacaacaaaccctcagccatcatcgccatctatcaggcgccggacgccaac
gccctggaggtcgccaaggcgatcaaggccgagatggataccctcgccagccgcttcccg
gacgacctcgagtacaaggtgctctatgacaccacagaatttgtcgagacctcgataacc
gaggtggtgcagaccctgtttatttcggtcgccctagtggtgtttgtggtctacatcttc
ctgcaggatgcgcgctcgaccttagtgccggggatcgccattcccgtctcgctaataggt
accttcgctttcctgttggccttcggcatgagcatcaacacagtctctctgttcgcgctt
attttggcgatcggtatcgtggtggatgatgccattgtggtggtggagaacgtcacccgc
ctgatggaagatgaggggctgtcgcccaccgaggcgacctccaaggcgatgaaggaggtg
acgggccccgttatcgccaccaccctggtgctgctggcggtgtttgcccccacggcggtg
atgccggggatcacagggcagatgtatgcccagttctctgtgactatctgtatctcagtg
cttatctcctcggtcaacgccctgaccctgagtccggccctgtgcgcctccctgttaaag
ccgcccaagaaacatacccatggcttccactacctgtttaacacctacttcgagcgcttt
accggcggctatatgaagctggtctcctcactggtgcgtaagctggtgctggtgggcgtg
gcctatgcctgtctgatcggcgtcactggcggcatcgccaaggtgttgccatcgggcttc
gtgcccatggaggataagaaggccttcatggtggatattcagctgccagatggtgcctcg
cttaaccgcaccgaagaggtgatgcgtaacctggtcaagctgacgctggaagagcctggg
gtggagaatgtgatccatgccagtggcttcagtatcctgaccggctcggtctcctctaac
ggcggcctgatgatcgtgaccctgtcgacctgggaggagcgcgactcgcccgacatggtg
gaggcggcgatcgtcgccaagttgcaggccaagtatgccgccaatccgtcggtgaaggcg
atggccttctcgctgccacctatcccgggggtggggagcgtcggcggtttcgagtttgtg
ctgcaggacacccaagggcgttcgccccaggagctggcctctgtgatgcgggcgcttatc
atgaaggccaacggacagcctgagatcgccatggcctttagtaacttccgcgccgacgtg
ccgcagatgtatgtggatgtggacagagacaaggctaaggcgttggggatctccttaaat
gagatcttctctaccatgcagaccatgctcggctctatgtatgtcaacgatttcaaccgc
ttcggtaaggtgttccgggtgatactccaggccgaaggcgagtttcgaaattccgacaag
gatatcgccagcttctatgtgcgctcggctagtggcgagatggtgcccctgagcacactg
gtgaaggtgacgcctatcctggggccggacgtgatgaacgcttataacatgtttagctcg
accaccatcaacggcttcccggcccctggctttagctcgggcgacgccatcgccgccatg
gaaagggcggctcaggagacgttgccggcgggctacaagtttgagtggacggggcagacc
tatcaagagatcaaggcgggtaacttagcgccgctgatcttcgccctggccctggtgttt
acctatctgttcctggtggcccagtatgagagttggagcattcccttcgccgtcatgctt
gcggtgcctatcgccatcctgggggccttcctcaacatcttgctggtgggaagcgagctc
aacctctatgcccagataggcctagtactcttgatcggtttggcctgtaagaatgccatc
ctgatcgtcgagtttgccaaacagctcagggaagagggtaagagtgttctggatgcggca
gaaaccgcggcgcgcctgcgttttcgcgccgtactcatgaccgccttctctttcctgctg
ggggtattacccttggtgattgccaccggcgccggcgcaggaagtcgtcgcgccctgggg
tattctgtattcggcggcatgatggcggcgactctggtgggtaccctgttggtgcctgtg
ttttacgtcatcatgcagaagctgcgtgagcgcatgaagggtgaaggcgcgacgagccaa
tag
DBGET
integrated database retrieval system
