Shewanella alkalitolerans: K0J45_08095
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Entry
K0J45_08095 CDS
T09228
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
shns
Shewanella alkalitolerans
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shns03009
]
K0J45_08095 (rluC)
Enzymes [BR:
shns01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
K0J45_08095 (rluC)
Ribosome biogenesis [BR:
shns03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0J45_08095 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
FHA
Motif
Other DBs
NCBI-ProteinID:
QYJ99143
LinkDB
All DBs
Position
1790457..1791416
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AA seq
319 aa
AA seq
DB search
MNNQQALNKVELVTIDEDNLGQRIDNFLVTKLKGVPKSMIYRIVRKGEVRVNKKRIKPEY
KLQDGDVVRIPPVRVSASEDKPGPSAKLTKVSQLEGRILFEDKAIIVLNKPAGIAVHGGS
GVDFGVIEAMRSLRPQQKFLELVHRLDKETSGVLLIAKKRSALKHLHDQLRYKKMQKDYM
ALVRGEWQNHDKVINAPLLKLTLKSGERIVRVNQEGKPSETRFKIMQRYQGATLVQASPV
TGRTHQIRVHCQYAGHPIACDEKYSEQKFDDAMRELGLNRLFLHAAQLKFTHPVTEEVMQ
VKAPLDKALQDLLNKLDKA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaacaagcgttaaataaagtcgaactggtaacgatcgacgaggataacctt
ggccagcgaatcgataattttctggtcactaaactgaaaggcgtccccaagagcatgatc
taccgtatcgtgcgtaagggcgaggtgcgcgttaacaagaagcggatcaagcccgaatat
aagctgcaagacggtgatgtagtgcgaatcccgcctgttcgcgtctccgccagcgaggac
aagccaggcccaagtgccaagttgactaaggtgtcgcagcttgaggggcgcatcctgttt
gaagacaaggccatcatagtgcttaacaagcccgcaggcattgctgtgcatggtggcagt
ggcgtggatttcggtgtgattgaggcgatgcgctcgcttagaccgcagcagaagtttctt
gaattagtccaccgcttagataaggaaacttcgggcgtcttgttgatcgccaagaagcgc
agcgcgcttaaacacctgcatgatcagctgcgttacaagaagatgcagaaggactacatg
gccttggttcgtggagagtggcaaaatcatgacaaggtgatcaatgcgccgctgttgaaa
ctcacccttaaatcgggcgagcgtatcgtgcgggtcaaccaggagggtaaaccctcggaa
acccgttttaagataatgcagcgttatcaaggtgccaccctggtgcaggccagtccggtt
accggacgtactcatcagatccgtgtgcattgccagtatgccggacaccccatcgcctgt
gacgagaaatacagcgagcagaagttcgatgatgccatgcgcgagttgggccttaatcgt
ctctttctccatgccgcccagcttaaatttacccatccagtgaccgaagaggtgatgcag
gtgaaggcgccactggataaggcactacaagacttgttgaataaattggataaggcatga
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