Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5285
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Entry
SHJGH_5285 CDS
T02531
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho00250
Alanine, aspartate and glutamate metabolism
sho00410
beta-Alanine metabolism
sho00430
Taurine and hypotaurine metabolism
sho00650
Butanoate metabolism
sho01100
Metabolic pathways
sho01110
Biosynthesis of secondary metabolites
sho01120
Microbial metabolism in diverse environments
sho02024
Quorum sensing
Module
sho_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SHJGH_5285
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SHJGH_5285
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SHJGH_5285
00430 Taurine and hypotaurine metabolism
SHJGH_5285
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SHJGH_5285
Enzymes [BR:
sho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
SHJGH_5285
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AGF64948
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All DBs
Position
complement(6003311..6004717)
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AA seq
468 aa
AA seq
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MALHRGPDKHEERTMSVNPFFGEANPVGGMTEAPPTHRLPDAALPPSTAYQLVHDELMLD
GNSRLNLATFVTTWMEPQAGVLMDECRDKNMIDKDEYPRTAELERRCVAMLADLWNAPDP
SAAVGCSTTGSSEACMLAGMALKRRWAKRNADRYPGARPNLVMGVNVQVCWEKFCTFWEV
EARTVPMEGDRFHLDPQAAAELCDENTIGVVGILGSTFDGSYEPVADLCAALDALQERTG
LDIPVHVDGASGGMVAPFLDEDLVWDFRLPRVASINTSGHKYGLVYPGVGWALWRDKEAL
PEELVFRVNYLGGDMPTFALNFSRPGAQVVAQYYTFLRLGREGYRAVQQSTRDVATSLAS
RIEALGDFRLLTRGDQLPVFALTTADHVTSYDVFDVSRRLREGGWLVPAYTFPANREDLS
VLRIVCRNGFSHDLADLFLDDLARLLPELRRQPHPLTRDKEAATGFHH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcacagaggtcccgacaagcacgaggagcggacgatgtcggtcaacccgttc
ttcggggaggccaaccccgtcggcggcatgaccgaggcaccgcccacgcaccggctcccg
gacgccgcgctgccgccgtccacggcgtaccagctggtgcacgacgagctgatgctggac
ggcaactcccggctcaatctggccaccttcgtcaccacctggatggaaccgcaggccggg
gtgctgatggacgagtgccgggacaagaacatgatcgacaaggacgagtacccgcgcacg
gccgagctggagcggcgctgcgtggcgatgctcgcggacctgtggaacgcgccggacccg
tcggcggccgtcggctgttcgacgaccgggtcgagcgaggcctgcatgctcgccgggatg
gcgctgaagcggcgctgggcgaagcggaacgccgaccgctatccgggcgcgcggcccaat
ctggtcatgggcgtcaacgtccaggtgtgctgggagaagttctgcaccttctgggaggtg
gaggcccggacggtcccgatggagggcgaccgcttccatctggacccgcaggccgccgcc
gagctgtgcgacgagaacaccatcggggtcgtcggcatcctcggctcgaccttcgacggc
tcctacgagccggtcgccgacctgtgcgcggccctggacgccctccaggagcggaccggg
ctcgacatcccggtgcacgtggacggcgcgtccggcgggatggtggcgcccttcctggac
gaggacctggtgtgggacttccgcctgccgcgcgtggcgtcgatcaacacctccgggcac
aagtacgggctggtgtatcccggcgtcggctgggcgctgtggcgggacaaggaggcgctg
cctgaggagctggtcttccgggtgaactacctgggcggcgacatgccgaccttcgcgctg
aacttctcccggcccggtgcccaggtggtggcgcagtactacacgttcctgcggctgggc
cgggagggttaccgggcggtgcagcagtcgacgcgggacgtggcgacctcgctcgcctcc
cggatcgaggcgctcggcgacttccggctgctcacgcgcggggaccagctccccgtgttc
gcgctgaccaccgccgaccacgtcacctcgtacgacgtcttcgacgtctcccggcggctg
cgcgagggcggctggctcgtgcccgcctacaccttcccggcgaaccgtgaggacctgtcc
gtgctgcggatcgtgtgccgcaacggcttctcgcacgacctggccgacctgttcctggac
gacctggcccgcctgctgccggagctgcgccgccagccgcaccccctgacccgcgacaag
gaggcggccaccggcttccaccactag
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