Sturnira hondurensis: 118976881
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Entry
118976881 CDS
T07222
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
shon
Sturnira hondurensis
Pathway
shon03013
Nucleocytoplasmic transport
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118976881 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
118976881 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118976881 (THOC1)
03041 Spliceosome [BR:
shon03041
]
118976881 (THOC1)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118976881 (THOC1)
Spliceosome [BR:
shon03041
]
Complex C
Other components
EJC/TREX
118976881 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118976881 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
118976881
NCBI-ProteinID:
XP_036887523
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARSRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDSKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPESMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIETFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRARQLLVAWQDQEGVHATPENLINALHKSGLSDLVESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttacccgaagcgcggtcgcggtttacgaagtct
accagggaggccctaaataacaaaaatatcaagccattgttgaataccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcttctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactccgtatgtgc
aatgatctattaagaagattatcaaaatcccagaatacagtcttctgtggccgaattcag
ctcttcttggccaggctttttcctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacattgggtcag
aagcacactgaagatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacttgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcagtgctatgagaagatttcatggaaaactttt
ctcaagtattcagaagaagttctagctgttttcaagagttataaattagatgatactcag
gcctcaagaaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagttgagcgacagtaactttcgacgacac
atcctattgcagtatctcattttattccaatatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccacccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatccgatagcaagccaacgagagtagtacggaagagaacagcaccagag
gatttcctgggaaaaggacccaacaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaacctctgccctgataatatggaagcctgtaaatcagacacaagggaatatatg
ccaactttggaggaattctttgaagaggccattgaacaagcagaccctgagagcatggtt
gaaaatgaatataaggctgtgaacaattcaaactatggttggcgagccctgagactacta
gcacggagaagtcctcacttcttccagccaaccaaccagcagttcaaaagtttgccagaa
tatcttgaaaatatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcggagagacaaacctgtaacaggagaacaaatagagacatttgccaacaaa
ttgggtgaacaatggaagattctggctccctacttagaaatgaaagactcggaaattaga
cagattgagtgtgacagcgaagacatgaagatgagagctaggcagttactagttgcctgg
caagatcaagagggagtacacgcaacgccggagaacctgattaatgcactgcataagtct
ggattaagtgaccttgtagagagtctaactaatgacaacgagacaaatagttag
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integrated database retrieval system
