Sturnira hondurensis: 118996222
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Entry
118996222 CDS
T07222
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
shon
Sturnira hondurensis
Pathway
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118996222 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
118996222 (DDX46)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118996222 (DDX46)
Spliceosome [BR:
shon03041
]
Complex A
U2 snRNP components
U2 related factors
118996222 (DDX46)
Complex B
118996222 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
118996222
NCBI-ProteinID:
XP_036915407
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSKSRSRGRRSRSSSPGNKSKKAENRRSR
SREKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAM
ENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEV
KKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEE
EVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEG
ITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQSQAIPAIMSGRDLIGIAKTG
SGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCV
YGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGF
EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV
IEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRD
SIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYA
YTFITEDQARYAGDIIKALELSGTTVPPDLEKLWGDFKDQQKAEGKIIKKSSGFSGKGFK
FDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVP
APTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAE
QLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRI
SEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQN
SYQPTNKGRYKVL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtcacgccactaccggaagcgatcggcatcgcggggacgctctggaagt
cgctctagaagtcgctcaccctcagacaaaagaagtaaacgaggggatgacagacggtct
aggagcagagatcgagacagaaggagagagaggtctcgcagcagggataaaagaaggtct
cggtcaagggacaggaagcgcctgaggcgttccagaagtagagaaagagacagaagtcga
gagcgaagaagatcccgaagtcgagacaggagacgctcaaagagtagaagccgcggccgg
cgatcccgatcctccagtcctggcaacaaaagcaagaaagccgagaatagaaggtctcgg
tctagagagaaaacagatggcggagaaagttcgaaagagaagaaaaaagacaaagatgat
aaggaggatgaaaaagaaaaagatgctggcaactttgaccaaaataaactggaagaagaa
atgagaaagcggaaagaaagggtagaaaaatggcgagaagagcaacgcaagaaggccatg
gaaaacataggggaactgaaaaaagaaattgaagagatgaaacaggggaaaaagtggagt
ttagaagatgatgatgatgatgaagatgatcctgccgaagctgaaaaggaaggaaatgaa
atggagggtgaggagttagatccattagatgcttatatggaagaagtgaaagaggaagta
aaaaagtttaatatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtccgggcca
acagtgacaaaagtggtcactgtcgtgacaaccaaaaaagcagttgtagatgctgataag
aagaaaggtgaactgatggagaatgaccaggatgccatggagtattcttccgaagaggaa
gaagtggacctgcagacagccctcacaggctaccagacaaaacagagaaagcttctggaa
ccagtagatcatggaaagattgaatacgaaccattcagaaaaaacttttatgttgaagtt
ccagaactagcaaaaatgtctcaagaggaggtgaatgtcttccggttggaaatggagggc
atcacggtcaaggggaaaggttgccccaagccgattaagtcttgggtccagtgtggaatt
tccatgaagatcctaaattctctgaaaaagcatggctatgaaaagcccacaccaatccaa
tctcaggcaattcctgctataatgtctggacgagacttgattggcattgccaagaccgga
agtggaaagactattgcttttctattgcccatgtttagacatatcatggatcagaggtca
ttagaagaaggagaggggccaatagctgtcatcatgacgccaactcgagagctggcttta
cagattaccaaggagtgcaagaagttttcgaagaccttggggctgagagtggtctgtgtc
tatggaggaacaggaatcagtgagcagattgctgaactgaaaagaggtgctgaaattatt
gtttgtacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaat
cttcgaagagtgacgtatgttgttttagatgaagcagacagaatgtttgacatgggtttt
gaaccacaggtcatgcgcattgtggataatgtccgtcctgatcggcagacagttatgttt
tcagctactttccccagagctatggaggctttggctcgcagaatcctgagtaaacccatt
gaagtgcaggttggaggcaggagtgtggtttgctcggatgtggagcagcaagtgattgtg
attgaagaagaaaagaaattcttgaagttacttgagcttctgggccattatcaggaatct
ggatctgtcattatatttgtggataagcaggaacatgccgatggtcttctgaaggattta
atgagagcatcttatccttgcatgtctcttcatggaggtattgatcagtatgacagagat
agcatcataaatgactttaagaatggaacctgcaagcttcttgtggccacttctgttgct
gcccgaggtctagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccat
tacgaagattacgtgcacagagcaggacggactggaagagcaggcaacaaaggttacgca
tacacttttatcacagaagaccaggcacgttatgctggcgacatcattaaagccctggaa
ctgtcggggaccacagtgcctcccgacctggagaagctgtggggtgacttcaaagaccag
cagaaagccgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaag
tttgacgaaacagagcaggctttggctaatgagaggaagaagttgcagaaagcagccctg
ggtctgcaagattcggacgatgaggatgctgcggtcgatattgatgagcaaatcgaaagc
atgtttaattcaaagaagagggtgaaggacatggctgctcctggaacatccagtgttcct
gctccaactgcaggaaacgctgagaagttagaaattgccaagagattggctcttagaatc
aatgctcagaaaaatttgggcattgagtctcaggtagatgtgatgcaacaggccaccaat
gcaattctcagaggtggcaccatcctggctcccactgtgtctgcaaaaactattgcagag
caacttgctgagaagatcaatgccaagctcaattatgtgcctttggagaaacaggaagag
gagagacaggatggtgggcagaatgaatcttttaagagatatgaggaagaattagagatc
aatgacttcccacagactgctaggtggaaagttacctccaaggaagccctgcagagaatc
agtgaatattccgaagctgcaattacaatcagaggcacatacttcccacctggcaaggaa
cccaaggaaggagagcggaaaatttacttggcaattgagagtgccaatgaactggctgtg
cagaaagcgaaggcagagatcaccaggctcattaaagaagagctgatccggctgcaaaat
tcgtaccaaccaacaaataaaggaagatacaaagttttataa
DBGET
integrated database retrieval system
