Sturnira hondurensis: 118999260
Help
Entry
118999260 CDS
T07222
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
shon
Sturnira hondurensis
Pathway
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118999260 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
118999260 (DHX38)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118999260 (DHX38)
Spliceosome [BR:
shon03041
]
Complex C
Other components
Step II factors
118999260 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
118999260
NCBI-ProteinID:
XP_036919636
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MADTNEDTSIHRLEGTDGDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASMKRR
EREEKDDGEDKKKSRISSYKDWEESKDDQRDAEEDGSDQSGRSIRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRDRDERDRSRHSS
RSEREGGSERSRRNEPESPRHRPKDAATPSRSTWEEEDNYGSSRRSQWESPSPTPSYRDS
ERSHRLSSRDRDRSVRSKYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRARREDGEE
GISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQKR
ISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIV
FTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVK
KEEEPDKAVTEDGKVDYRTEQKFANHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELL
TIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMG
GNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTD
VLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQED
YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL
PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQI
YPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLG
VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS
CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNN
YSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAA
KLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLA
ELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRST
KIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccaatgaggatacctcaatccacagattggaaggcactgatggggactct
caggttggtggtcttatttgcaagaccaaaagtgcggccagtgagcagcatgtcttcaag
gcccctgctccccgcccttcattgctgggactggacttgttggcttctatgaaacggagg
gagcgagaggagaaagatgatggggaagacaagaagaagtccagaatctcttcgtacaag
gactgggaagagagcaaggatgaccagagggatgccgaggaggacggcagtgaccagtct
ggtagaagtatccgaaaagacagacattatcgatctgctcgggtagagactccatcccat
cctggtggtgtgagtgaagagttttgggaacgtagtcggcagagagagcgggagcgccgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggatcggaagaaggagagatcgcgg
gatcgagactctgaccgcaagagagacagagatgagcgggatagaagcaggcacagcagc
agatcggagcgggaaggagggtcagagcgcagtaggagaaatgaaccagagagcccgcga
caccgacctaaagatgcagccaccccttcaaggtctacctgggaggaagaggacaactat
ggctcctcaaggcgctcgcagtgggaatcaccctcccctacgccttcttatcgggattct
gagcggagccatcggctgtccagtcgagatcgggataggtctgtgaggagcaagtactca
gatgacacacctttgccaacaccatcctacaaatacaatgagtgggctgatgacagaaga
catctagggtccactccacgtttgtccaggggccgagcaagacgtgaggacggtgaagaa
gggatttcatttgacacagaagaggagcggcagcaatgggaggatgaccagaggcaagct
gaccgggattggtacatgatggatgaaggatatgatgagttccacaatcccctggcttac
tcctccgaggactatgtgaggaggcgggagcagcatctgcataaacagaagcagaagcgc
atttcagctcagcggagacagatcaatgaggataacgagcgctgggagaccaaccgcatg
ctcaccagtggcgtggtccatcggctagaggtggacgaagactttgaagaggatagtgca
gccaaggtgcatctgatggtgcataacctggtgcctcccttcctggacgggcgcattgtt
ttcaccaagcagccagaacctgtgattccagtcaaggatgccacttctgacctggccatc
attgctcgaaaaggcagtcaaacagtgcggaagcacagggagcaaaaggaacgcaagaag
gctcagcacaaacattgggagctggctggaaccaaactgggagatataatgggtgtcaaa
aaagaggaggagccagataaagcagtgacagaagatggtaaagtggattataggacagag
cagaagtttgcaaatcacatgaagaaaaagagtgaagccagcagcgaatttgcaaaaaag
aagtcaattctggagcagaggcagtacctgcccatcttcgctgtgcagcaggaactactc
accattattagagataacagcattgtgatcgtggttggggagacagggagtggtaagacc
actcagctgacccagtacttgcatgaagatggttacacagactacgggatgatcgggtgc
acccagccccggcgtgtggcggccatgtcagtggccaagagggtcagcgaagagatgggg
ggaaaccttggtgaggaggtgggttatgccatccgcttcgaagactgcacttcggagaac
actttgatcaaatacatgactgatgggatcctgctccgagagtccctccgggaggcagac
ctggatcactacagcgccatcatcatggatgaggcccacgagcgctcgctcaacaccgac
gtgctcttcgggctgcttcgggaggtggtggctcggcgctcagacctgaagctcattgtc
acatcggccactatggatgcagataaatttgctgccttttttgggaatgttcccatcttc
cacatccctggtcgtaccttccctgttgacatcctcttcagcaagaccccacaggaggat
tacgtggaggccgcagtgaagcagtccttgcaggtgcacctgtcaggggcccctggggac
atcctcatcttcatgcctggccaggaggacatagaggtgacctcagaccagatcgtggag
catctggaagagctggagaatgcacccgccttggctgtgctgcccatctactcccagctg
ccttctgacctacaggccaaaatcttccagaaggctccagatggcgttcggaagtgtatt
gttgctaccaacattgctgagacatctctgactgtcgacggcatcatgtttgttatcgat
tctggttactgcaaattaaaggtcttcaaccccaggattggcatggatgctctgcagatc
taccccatcagccaggccaatgccaaccagaggtcggggcgagctggcaggacgggccca
ggtcagtgtttcaggctctacacccagagcgcctataagaatgagctcctgaccaccacg
gtgccggagatccagaggaccaacctggccaatgtggtgctgctgctcaagtccctgggg
gtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatgctcaac
tccatgtatcagctctggatccttggagccctggacaacacaggtggtctgacttcaact
gggcggctgatggtggagttcccgctggacccagccctgtccaagatgctcattgtatca
tgcgacatgggctgcagctcggagatcctgctcattgtctccatgctctctgtcccagcc
atcttctacaggcccaagggccgagaggaggagagtgatcaaatccgggagaagtttgct
gtccctgagagtgatcatttgacctacctgaatgtttacctgcagtggaaaaacaataat
tactctaccatctggtgtaacgatcattttatccatgccaaagccatgcggaaggtccgg
gaggtgcgggctcagctcaaggacatcatggtgcagcagaggatgagcctggcttcatgt
ggcaccgactgggacatcgtcaggaagtgtatctgtgctgcctatttccaccaggcagca
aagctcaagggaatcggggagtatgtgaatatccggacggggatgccctgccatttgcac
cccaccagctccctttttggaatgggctatactccagactacatagtgtaccacgagttg
gtcatgaccaccaaggagtacatgcagtgtgtgactgctgtggacggagagtggctggcg
gagctgggccccatgttctacagcgtgaaacaggcaggaaagtctcggcaggagaaccgc
cgacgggccaaagaggaagcctctgccatggaggaagagatggcgctggccgaggagcag
ctgcgagcccggcggcaagagcaggaaaagcgcagccccctaggcagtgtcaggtctaca
aagatctacactcctggtcgaaaggagcaaggggagcccatgactcctcgccgcactcca
gcccgctttgggctgtga
DBGET
integrated database retrieval system
