Sturnira hondurensis: 119002024
Help
Entry
119002024 CDS
T07222
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
shon
Sturnira hondurensis
Pathway
shon03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119002024 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shon03400
]
119002024 (LIG4)
Enzymes [BR:
shon01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119002024 (LIG4)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119002024 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
ATG17_like
Motif
Other DBs
NCBI-GeneID:
119002024
NCBI-ProteinID:
XP_036923601
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRADKIRYFREFLDSWRKFHDALHKNQNDV
TDSFYPAMRLILPQLERERDAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGQLTIQQVNDILDSIASNNSARRKDLVKKSFLHLISKCSA
LEQKWLIRMIVKDLKLGFSEQTVFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSPFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDVYEYFSRNGYKYTE
QFGASSQEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQNFMQKGNKFDIKRMVEYSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILSSIFTPIPGRIEIVQKTQAHTNKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVTGLVDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKPPSDEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHFCVGGDDGPQEKKRKAAPRMKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGISSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECFRTKSCVPWQPRFMTHMCPSTKQHFAREYDCYGDSYFTDTDLKQLKEVFTG
IKSLSEQTPKEMASVIADLECRYSWDYSPLSMFRHHTIYLDLYTVINDLNSKIEGTRLAM
TALELRFHGAKVVSYLAQGVSHVIIGKDHSRVADFKAFRRTLKRKFKILQEEWVTDSIDR
CELQEENEYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacctcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagataaaatcagatacttcagg
gaatttttagattcttggaggaaatttcatgatgcccttcataagaaccaaaatgatgtc
acagactctttttatccagcaatgagacttattcttcctcagctagaaagagagagagat
gcctatgggatcaaagaaactatgcttgctaagctttatattgaattgctcaatttacct
agaggaggaaaggatgctcttaaacttctaaattacagaacacctactggaactcgtgga
gatgctggagactttgcaatgattgcatacttcgtattgaaaccaagatgtttacagaaa
ggacaattaaccatacagcaagtaaatgacattttagactcaattgccagcaataactct
gccagaagaaaggacctagtaaagaagagttttcttcaccttataagtaagtgttcagca
cttgaacaaaagtggcttatacggatgattgtaaaggacttaaagcttggttttagtgag
caaactgtattttctgtttttcataacgatgctgttgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgatccttcagtaggacttagtgatatttctatc
actttattctctccctttaagccaatgttagccgcaatagcagatattgagcgaattgag
aaggacatgaaaaaccagagtttctacattgaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggtgatgtatatgagtacttctcacgaaatggatataaatatacagaa
cagtttggtgcttcttctcaggagggttctctcacaccattcattcataatgcattcaaa
acagatatacaaatttgtatccttgatggtgagatgatggcctacaatcctaatacccaa
aattttatgcaaaagggaaataagtttgatattaaaagaatggtagaatattctgatctg
caaacttgttattgtgtttttgatgtattgatggtcaataataaaaagctgggacatgaa
accctgaaaaagaggtatgaaattcttagtagtatttttacaccaataccaggtagaata
gaaatagtgcagaaaactcaagctcatactaataaagaagtaatcgatgctctaaatgaa
gcaatagataaaagagaagagggaatcatgataaaacatcctctatccatttataagcca
gacaaaagaggtgaaggatggttaaaaattaagccagaatatgtaactggactggtggac
gaactggacatcataattgttgggggctactggggtaaaggttcacgtggtggaatgatg
tctcattttttgtgtgctgtagcagagaagcccccttctgatgaaaaaccatccgtgttt
catacactttgtcgtgttggctcaggttacaccatgaaagaactatatgatctgggtttg
aagttggccaaacactggaaaccttttcataaaaaagctccaccaagtagcattttatgt
ggaacggagaagccagaagtatacattgaaccttgtaattctgtcattgtccagattaaa
gcaacagagattgttcccagtgacatgtataaaactggctgcactttgcgttttccacga
attgagaagataagagaagacaaagagtggcatgaatgcatgactctggatgacttagaa
caacttcgagggaaagcatctggaaagcttgcatctaaacacttttgtgttggtggtgat
gacggaccacaagaaaaaaagaggaaagctgccccaaggatgaagaaagttattggaatt
atcgagcacttaaaagcacctaacctttctaacataaacaaagtttccaatatatttgaa
gatgtggagttttgtgttatgagtggaataagtagccatccaaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacttactgtgtt
attgcagggtctgagaacataagagtgaaaaacataatttcttcagataaacatgatgtt
gtcaagcctgagtggctgctagaatgtttcaggacgaaaagctgtgtgccgtggcagcct
cgctttatgactcatatgtgcccatcaacaaaacagcattttgcccgtgaatatgattgt
tatggtgatagttatttcactgatacggatttgaagcaactgaaggaagtgttcacagga
attaaaagtcttagtgaacagactcctaaagaaatggcttctgtgattgcggatttagaa
tgtcggtattcctgggactactctcccctcagtatgtttcgacaccacactatttatttg
gacttgtatactgttattaatgacttgaatagcaaaatcgagggaacaagattagctatg
acagccttagagcttcgttttcatggagcaaaagtagtttcttatttagctcaaggagta
tctcatgtaatcattgggaaggatcatagtcgtgttgcagattttaaagcttttcgaaga
acccttaagagaaagtttaaaattctacaagaagaatgggtaactgattcaatagacaga
tgtgagttacaggaggaaaatgaatatttgatttaa
DBGET
integrated database retrieval system