Shewanella putrefaciens 200: Sput200_0258
Help
Entry
Sput200_0258 CDS
T02015
Name
(GenBank) pseudouridine synthase Rlu family protein, TIGR01621
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shp03009
]
Sput200_0258
03016 Transfer RNA biogenesis [BR:
shp03016
]
Sput200_0258
Enzymes [BR:
shp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Sput200_0258
5.4.99.29 23S rRNA pseudouridine746 synthase
Sput200_0258
Ribosome biogenesis [BR:
shp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sput200_0258
Transfer RNA biogenesis [BR:
shp03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Sput200_0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADV52746
UniProt:
E6XRQ2
LinkDB
All DBs
Position
277277..277966
Genome browser
AA seq
229 aa
AA seq
DB search
MYQIIADEADFLVISKFPKVHFHSQDGTAGVVAQIEQDLGIKLFAVHRLDTPTSGLLILA
KSTAAAKQFTELFTAHKVQKYYLALAKGKPKKKQGWVIGDMAKSRRSMFKLLRTKENPAI
TQFFSVSVGDGLRLYLLKPHSGKTHQLRVALASLGVPILGDELYGGAVADRCYLHAYCLH
FRYQDAVTGWRDYTYLNIPQQGEVFEFGAVSDALALWHKPETLTWPSKE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaatcatagctgatgaggctgattttcttgttatttcaaaattccctaaggtg
cactttcatagtcaagacggaaccgcgggtgtagtcgcacagattgagcaagatttaggg
attaagctttttgctgtgcatcgactcgatacgcccacatctggtctgttgattctggct
aagagtactgccgcggcaaaacaatttactgagctatttaccgcccataaagtgcagaaa
tattacctcgccctcgcaaaaggtaagccgaaaaagaaacaaggctgggtaattggtgat
atggcaaagtcacgccgtagtatgtttaagctgttgcgaaccaaagaaaaccctgccatc
acccaatttttttcagtcagtgtcggagatggattgcgactttatcttctcaaaccccat
tcgggaaaaacccatcaattgcgagtggcattggcaagcttaggtgtaccgattttaggc
gatgaattatatggtggtgctgtggctgaccgttgctatttacacgcttattgcctgcat
ttccgctatcaggatgcggtaactggttggcgggattatacctatctgaatataccacag
cagggcgaagtgtttgagttcggggcagtaagtgacgcgctggctctttggcataagcca
gagactctgacatggccctctaaggagtag
DBGET
integrated database retrieval system
