Shewanella putrefaciens 200: Sput200_2975
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Entry
Sput200_2975 CDS
T02015
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shp03016
]
Sput200_2975
Enzymes [BR:
shp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sput200_2975
Transfer RNA biogenesis [BR:
shp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sput200_2975
Prokaryotic type
Sput200_2975
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADV55377
UniProt:
E6XJ84
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All DBs
Position
complement(3369725..3370681)
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AA seq
318 aa
AA seq
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MARRPKGRFIDGIVLLDKSTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRPVTFTEAQLLSALEHFRGDTQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFISLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYAKMVTLEQLEALVTQAHEQQIDQSVLLDPLL
LPMDTAVADFPEVNVPEASAAYLMQGQAVRVTGLKADTLVRITLGDAHRFVGIGAMNDDG
LLAPKRLIVIHDEPIVTD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtccgaaaggccgttttatcgatgggatagtgttactggataaatccact
ggcatgagttctaactttgccttgcaaagggtaaagcgcttttttaatgcgaataaagcc
gggcatacgggtgcactcgatccgttagcgacaggtatgttacctgtgtgcctaggtgaa
gcgactaagttttcccagcacttattagatgctgataaacgttacttagtgacagcaaaa
ctgggcgagcgtaccgataccagtgattcagatggtgaagtggttcagacgcgcccagtt
acatttactgaggcgcaactactgagtgcgcttgagcactttcgtggtgacactcagcaa
gtgccttctatgtattccgcgctgaaatatcaggggcagcctctgtataaatatgcgcgt
gaaggcatagaagtgccgcgagaatctcgccctattacggtatttgagcttaatttcatc
agtcttgaaggtgatgagttgaccttagacattcattgctctaaagggacttatattcgc
accatcattgatgatcttggtgaaatgttaggttgtggcgcccatgtgattatgttgcga
cgaactcaagttgcacagtatccctatgccaaaatggttacactagaacagctcgaagca
cttgtcacccaagcacatgaacaacagatagatcagagtgtattactcgatcctctctta
ttacccatggatacggcagtggctgactttcctgaggtcaatgtgcctgaagcgagtgcg
gcttatttgatgcaaggccaagcggtacgtgtgacaggtctaaaagctgacacattagtg
cgtatcaccttaggggatgcgcatcgattcgttggtattggtgcaatgaatgatgatggc
cttttggcgccgaaacggctcatagtgatccatgacgagccgatagtcacagattaa
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