Shigella sp. PAMC 28760: A0259_01025
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Entry
A0259_01025 CDS
T04390
Name
(GenBank) formate dehydrogenase subunit beta
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00630
Glyoxylate and dicarboxylate metabolism
shq00680
Methane metabolism
shq01100
Metabolic pathways
shq01120
Microbial metabolism in diverse environments
shq01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A0259_01025
09102 Energy metabolism
00680 Methane metabolism
A0259_01025
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Gene cluster
GFIT
Motif
Pfam:
Fer4_11
Form-deh_trans
Fer4_9
Fer4_7
Fer4_10
Fer4_6
Fer4_21
Fer4_2
Fer4
Fer4_17
Fer4_16
Fer4_4
Fer4_3
Fer4_8
Fer4_22
Fer4_20
Fer4_18
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
AMR21319
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Position
complement(208842..209744)
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AA seq
300 aa
AA seq
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MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVG
NNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQ
YANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCP
TGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGL
PENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaatctcaagatatcattcgtcgttccgcgactaacggtctgacccccgcg
cctcaggcgcgggacttccaggaagaagtggcgaaactcatcgacgttaccacctgtatc
ggctgtaaagcctgtcaggtggcgtgttcagagtggaacgacattcgcgataccgtcggc
aataacattggggtgtacgacaaccccaatgatttaagcgccaaatcgtggacggtaatg
cgcttctcggaagtggagcagaacgacaaactggaatggctgatccgcaaagacggctgt
atgcactgttccgatccaggctgcctgaaagcgtgcccggcggaaggtgcaattattcag
tatgccaacggtatcgtcgacttccagtccgagcagtgcattggctgcggttattgcatt
gcgggctgtccgttcgacattccgcgcctcaacccggaagacaaccgcgtctacaaatgt
acgctgtgcgttgaccgcgtggtggttgggcaagaaccagcctgcgtgaagacctgccca
acgggcgcgattcacttcggtacgaaagagtcgatgaaaacgctggcgagcgagcgcgtt
gctgagctgaaaacccgcggttacgacaatgcgggtctgtacgatccggcaggcgtcggt
ggtacacacgtcatgtacgtgctgcaccatgctgacaagccaaatctgtatcatggcttg
ccggagaacccggaaatcagcgaaaccgtgaaattctggaaaggcatctggaaaccgctc
gcggctgttggctttgcggctacctttgcggccagtatcttccactacgtgggtgtcggt
ccgaaccgtgcggatgaggaagagaataatctgcacgaagagaaagacgaggagcgcaaa
tga
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