Shigella sp. PAMC 28760: A0259_05235
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Entry
A0259_05235 CDS
T04390
Name
(GenBank) transcriptional regulator BetI
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
shq
Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shq03000
]
A0259_05235
Transcription factors [BR:
shq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
A0259_05235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
LacI
DUF1744
HTH_3
TetR_C_31
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
AMR22076
LinkDB
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Position
complement(1078502..1079089)
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AA seq
195 aa
AA seq
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MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEAT
MRDITSQLRDAVLNRLHALPQGSAELRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQP
MLYRLQQVSSRRLLSNLVSEFRRELPRHQAQEAGYGLAALIDGLWLRAALSGKPLDKPLA
HSLTRHFITQHLPTD
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattggggatgcagtcgatccggcgcagacaactgatcgacgccacgctggaa
gcaataaatgaagtgggcatgcacgatgcaacgatcgcgcagatcgcccgccgtgcaggc
gtttctacggggatcatcagccactatttcagggacaaaaatggtctgctggaagcaacc
atgcgcgatatcaccagtcagctgcgtgacgcggttttgaatcgattacatgcacttccg
cagggcagtgcagagctgcgattacaggcgattgttggcggaaacttcgatgaaacgcag
gtgagcagtgcggcgatgaaagcctggctggcgttctgggccagcagtatgcatcagccg
atgctctatcgtttacagcaggtcagcagccgccgcttgctgtcgaatctggtgagcgag
tttcgccgcgaattgccgcgccaccaggcacaggaagcgggctacggccttgccgcgctg
attgacggattatggctgcgcgcggcactgagcggcaaaccgctggataaacctctcgca
cactcgctgacccgtcactttattactcagcatttacccaccgattaa
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