Shigella sp. PAMC 28760: A0259_14025
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Entry
A0259_14025 CDS
T04390
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00521
Streptomycin biosynthesis
shq00523
Polyketide sugar unit biosynthesis
shq00541
O-Antigen nucleotide sugar biosynthesis
shq01100
Metabolic pathways
shq01110
Biosynthesis of secondary metabolites
shq01250
Biosynthesis of nucleotide sugars
Module
shq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
A0259_14025
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
A0259_14025
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
A0259_14025
Enzymes [BR:
shq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
A0259_14025
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AMR23666
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Position
complement(2788749..2789294)
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AA seq
181 aa
AA seq
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MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKSTKGVIRG
LHFQLPPYSQAKLVRCVVGEVYDVVVDIRKDSKTFGKWVGVNLSAENKRQLWIPEGFAHG
FEVISEVAHFLYKTNNYYNATMEKGIRWDDEYLAINWKEKKAIISEKDMKQPSFRELFEK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattaaaactgaaattcctgatgtattaatatttgaaccaaaagtatttggg
gatgagcgtggtttttttatggaaagcttcaatcagaaagttttcgaagaagctgtgggg
cggaaggttgaatttgttcaggataaccattctaagtctactaaaggagtaattagagga
ttacattttcaattaccaccttattcacaggcaaaattagtacgctgtgtagtaggtgag
gtatatgacgttgttgttgatataaggaaagattctaaaacttttggcaaatgggtcggt
gtaaatctttctgctgaaaacaaacgacagttgtggattccagaaggattcgcccatggt
tttgaagtgattagtgaagttgctcattttttatacaaaacaaataattattataatgca
actatggaaaaaggtataagatgggatgatgaatatttagctattaattggaaagaaaaa
aaagcgataatctctgagaaagacatgaaacaaccatcattcagagaactttttgagaaa
gtttaa
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