Sarcophilus harrisii (Tasmanian devil): 100916176
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Entry
100916176 CDS
T02286
Symbol
HCN2
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04024
cAMP signaling pathway
shr04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100916176 (HCN2)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100916176 (HCN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100916176 (HCN2)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100916176 (HCN2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100916176
NCBI-ProteinID:
XP_031804131
Ensembl:
ENSSHAG00000009552
LinkDB
All DBs
Position
1:670328373..670351710
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AA seq
972 aa
AA seq
DB search
MDGRAGSARPGDGQGPPAAQPPPPPPQPSPQQPQCPPKPEPPQPEPQPPPPPPPQQQQQP
PEREREPGPGPGGPGGPGSPGGPEPAAEPEPGGRARGSLGARPGKPPPGPAAAKGSPNGE
CRRGGEPPQCSPGPGPGPGPGPPEDAAAAAAAAARGPKVSFSCAPGSGPASGPGSPGPAL
KAGDEAGPGDCDEAGPGGEARGSQASFLQRQFGAMLQPGVNKFSLRMFGSQKAVEREQER
VKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKDETTAPWIVFNVVSDTFF
LMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRTWFVVDFVSSIPVDYIFLIVEKGIDSE
VYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLISMML
LLCHWDGCLQFLVPMLQDFPKNCWVSINGMVNHSWSELYSFALFKAMSHMLCIGYGRQAP
ESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAD
FRQKIHDYYEHRYQGKMFDEDSILGELNGPLREEIVNFNCRKLVASMPLFANADPNFVTA
MLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTR
GRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQ
HDLHSGVFNNQENEIIQEIVKYDREMVQQAELGQHPGLYPAAQPQVTSAIATLQQAVAMS
FCPQMASPLVGPLALSSPRMMYAQAVPSPFSVSPILFQAPPPPQPPPPPAAASPPSQSPR
ASRTFPYGAKGESGSQLSLGPSRAPGSPQRPAAHKSTQALHTPCLSHESRPLSASQPSLP
QPSGPAPGPPPGSSREASSSTPRLGPGPPRLALPHQLSSGAVYAGPGPAPAQDSGAGAHE
VDSARSRLSSNL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcgggcgggcagcgcgcggcccggggacggccaggggccgcccgcagctcag
ccgccgccgcctccgccgcagccttcgccgcagcagcctcagtgtccgcctaagccggag
ccaccgcagccggaaccgcaaccgccgccgccgccgccgccacagcagcagcagcagccg
cccgagcgagaacgggagccgggcccgggcccgggcggccccgggggtcccggcagcccc
ggaggtccagagcctgccgcggagccggagccgggcggccgggcccggggcagcctgggc
gcgcggcccgggaagccgccccccggcccggccgcggccaaaggcagcccaaatggcgag
tgccggcgcggaggggagcctccgcagtgcagcccgggccccggccccggccccggcccg
ggacccccggaggatgcggccgccgccgccgcagcagccgcgcggggccccaaggtctcc
ttctcttgcgcgcccggttccggccctgcctcgggccccggttccccggggccggcgctc
aaggcgggcgacgaggcggggcccggggactgcgacgaggccggccccggaggggaggct
cggggcagccaggccagtttcctgcagcgccagttcggggctatgctccagcccggggtc
aacaagttctcgctgcgcatgttcggcagccagaaggccgtggagcgggagcaggagcgg
gtcaagtcggcgggggcctggatcatccatccctacagcgacttcaggttctactgggac
ttcacgatgctgctcttcatggtggggaatcttatcatcattcccgtgggtatcaccttc
ttcaaggatgagaccacggcaccgtggatagtgttcaacgtggtctcagataccttcttc
ctcatggacctggttctgaacttccgcaccggtattgtcatagaggacaacactgagatc
attctggaccccgagaaaatcaagaagaagtatctgcgcacgtggttcgtggtggacttt
gtgtcctccatccctgtggattacatcttccttattgtggaaaagggcatcgactcggaa
gtctacaagactgcccgcgcactgcgcattgtgcgatttaccaaaatcctcagtctcctg
cgtctgctgcgtctctcccgcctcatccgctacatccaccagtgggaggagatcttccac
atgacctacgacctggccagtgccgtcatgcgcattttcaacctcatcagcatgatgctg
cttctgtgccactgggatggctgccttcagttcctggtgcccatgttacaggacttccct
aagaactgctgggtctccatcaatggcatggtgaaccactcctggagtgagctctactcc
ttcgccctgttcaaggccatgagccacatgctgtgcatcgggtacgggcgccaggccccc
gagagcatgaccgacatctggctgacgatgctgagcatgatcgtgggggccacctgctac
gccatgttcattggccacgccacagctctcatccagtccctggattcctcaaggcgccag
tatcaggagaagtataaacaggtggagcagtacatgtctttccacaagctgcccgctgac
ttccggcagaagatccatgactactatgagcatcgctaccaaggcaagatgttcgatgag
gacagtatcctgggcgagctgaacgggcccctgcgagaggaaatcgtgaactttaattgc
cggaagctggtggcctccatgcctctctttgccaacgcagaccccaactttgtcaccgcc
atgctgaccaagctcaaattcgaggtctttcagcccggggactacatcatccgtgagggc
accattggcaagaaaatgtacttcattcagcacggtgtggtcagcgtcctcaccaagggc
aacaaggagatgaagctctcagatggctcctactttggggaaatctgcctgctgacccgg
ggccggcggacagccagcgtccgagctgacacctactgtcgcctctactccttgagtgtg
gacaactttaatgaagtgctggaggagtatcccatgatgaggcgggccttcgagaccgtg
gccattgaccgacttgatcgcattggcaagaagaactcgattctgctgcacaaggtccag
cacgacctgcactcgggcgtcttcaacaaccaggagaacgagatcatccaggagattgtg
aagtacgaccgggagatggtgcagcaggcggagctgggccagcacccggggctctacccg
gcggcgcagccccaggtcacctcggccatcgccaccctgcagcaggcggtggccatgagc
ttctgcccgcagatggccagcccgctggtgggccccctggcgctgagctccccgcggatg
atgtacgcgcaggccgtgcccagccccttctcggtctcgcccattctcttccaggcccct
cccccgccgcagcccccccctcccccggccgcagccagtcccccgtcgcagagcccgcgg
gccagccggaccttcccgtacggggccaagggggagtcgggctcccagctgtcgctaggc
ccgtcccgagccccgggctcgccccagcggcccgccgcccacaagagcacacaagccctg
cacacgccctgcctgagccacgagtcccggcctctgtcggcctcccagccctccctgccg
cagccctcgggccccgcccccggccccccgcccggctcctcccgggaggcgagcagctcc
accccgcgcctgggccccggcccaccccgcctggccctgccccaccagctgtccagcggc
gccgtgtacgcaggcccgggcccggccccagcccaggactcgggggccggcgcgcacgaa
gtggactcggccagatcgcggctctcttccaacttgtga
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