Sarcophilus harrisii (Tasmanian devil): 100925029
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Entry
100925029 CDS
T02286
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04340
Hedgehog signaling pathway
shr04360
Axon guidance
shr05200
Pathways in cancer
shr05205
Proteoglycans in cancer
shr05217
Basal cell carcinoma
shr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100925029 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100925029 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100925029 (SHH)
05205 Proteoglycans in cancer
100925029 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
100925029 (SHH)
05217 Basal cell carcinoma
100925029 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shr01002
]
100925029 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shr00536
]
100925029 (SHH)
Peptidases and inhibitors [BR:
shr01002
]
Cysteine peptidases
Family C46: hedgehog family
100925029 (SHH)
Glycosaminoglycan binding proteins [BR:
shr00536
]
Heparan sulfate / Heparin
Morphogens
100925029 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
100925029
NCBI-ProteinID:
XP_031795387
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All DBs
Position
5:complement(206290868..206303199)
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AA seq
480 aa
AA seq
DB search
MDEMLLLTRFLLVVLVSSLLMSSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSD
FLAFLDREDGAKKVFYVIETREPRERLLLTAAHLLFIAPHNDSSPEPLPPGEPGLPPPEQ
PSGWAWQKPPPGVAAGRQSLFASRVRPGQRVYVMEERGGDRRLLPAAVHSVSLREEASGV
YAPLTAQGTILINRVLASCYAVIEEHSWAHWAFAPFRLAHALLAVLSPAGRDWGRGGGGP
GGGGGGRAVLPAASPDVPDAPDAGATTAGIHWYSQLLYQIGTWLLDSDALHPLGMAVKSS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgctgctgctgacgagatttctgctggtggtcctcgtctcttctctcttg
atgtcctcggggctggcatgcggacctggcaggggatttgggaagaggcggcaccccaaa
aagctgacccccttagcctacaagcagtttatccccaacgtggcggagaagaccctaggg
gctagtggaagatacgaagggaagatctccagaaactccgaacgatttaaagaactcacc
cccaattacaaccctgacattatatttaaggatgaagaaaacaccggagcggaccggctg
atgactcagaggtgtaaggacaaactgaatgccctggctatctctgtcatgaaccagtgg
cccggggtgaaacttcgggtcactgagggctgggatgaggatggtcaccactctgaagag
tcgctgcactatgagggccgggcagtggacatcaccacctcagaccgggaccgaagcaaa
tatggcatgctggcccgcctggccgtggaggctggcttcgactgggtctattacgaatct
aaagcccatatccactgctctgtgaaagcagagaactcagtggccgccaagtcgggcggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcacgaagctggtgaaggac
ctgagccccggggatcgcgtgctggccgccgatgaccaaggccgcctgctctacagcgat
ttcttggccttcttggaccgggaggacggcgccaaaaaggtgttctacgtgatcgagacg
cgggagccccgggagcgcctgctgctcaccgccgcgcacctgctcttcatcgccccgcac
aacgactcgagtccagagccgctgcctccgggggagccggggctgccgccgccggagcag
ccgtcgggctgggcctggcagaagccaccgcccggggtcgcggccggacgccagtcgctc
ttcgccagccgcgtccgccccggacagagggtctacgtgatggaggagcggggcggcgac
cggaggctgctgccggccgccgtgcacagcgtgtccctgcgcgaagaggcctcgggagtt
tacgcgccgctcacggcgcagggcaccatcctgatcaaccgcgtgctggcctcttgctac
gcagtcatcgaggagcacagctgggcgcactgggcgttcgcccccttccgactggcccac
gccctgctggccgtgctctcccccgcgggcagggactggggccggggcggcggcggcccc
ggcgggggcgggggcggccgggccgtcctccccgcagcctcgccagatgtgcccgatgct
ccagatgctggggccacgacggccggcatccactggtactcgcagctgctctaccaaata
ggcacctggctgttggacagtgacgcactgcaccccctggggatggcagtcaagtccagc
tga
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