Sarcophilus harrisii (Tasmanian devil): 100934794
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Entry
100934794 CDS
T02286
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C
KO
K14316
nuclear pore complex protein Nup121
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100934794
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100934794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100934794
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100934794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
100934794
NCBI-ProteinID:
XP_031823824
Ensembl:
ENSSHAG00000015124
LinkDB
All DBs
Position
4:complement(448484827..448499710)
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AA seq
1100 aa
AA seq
DB search
MGGYLGRPSSPEPPRRERREPAGASPHLLSPARRLHLRDHLTAPNRFSLAPRRRYPIQQA
QYSLLGTLPTVCWEGYQRKNVLSPRNSHMICSPVTVRIARPDLPRSPLEPVMNSAVVNSP
SRNTPDPCAKETVMNALKESRKRAVEEDDQIFCDAQENKRRRHDSSGSGHSAFEPLVANG
APASLVPKPGSLKRSLTSQCAEDNLNKRSRTSSTSSLTNTTPGGIPSSIRNAITSSYSST
RGFSQLWKRSGPSTSPLSSPASSRSQTPERPVKKAREEELHQSSSLTPMTSDKESQAEKV
TDTPTWKKQSSWSTPSTSGSGGKRKRKVQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEK
KAALQWFNKVLEEKTDPPPASVAESSPAPRPLSFTSSETATSSSAAPPAASANLLLDSLK
KMQSSPNPAALTDAAGAAPAAAPSPLKPASPPAAPGPSEPGPPAATSVASKPVSTFSLMS
PATTLAATTSSSSQAPPAPVSEGSSKPLTSPSPKPSLLFGMLSAPPPTSSAPTPTPAPAP
TPTPAPAPTPTSTSTPAPAPTPTPTTSSAPSPATPMFKPIFGAPPKMESGVSPAAPPTPT
PASCGSVLSTTPSSSTTTFKPIFGSMGPPSSLPLASPFLKQPSSSAPSTAVTTAVLAPLF
SGLPSAQSAAAPAPTTTAAAASTGTTDSGAKPAFGFGLSSLAGTAGAAATATTTSATTTT
PTPSLSQPFLFGAAPAAGSSFTPSTGSMFQFNKPAATTSSTAAATTANTFGAVQATPSGT
GGFGFGGSVTTAALPTTSQVTLTFGPTTTTAAFSSPFGSSIKTMPPPPYPGATPQPAFGS
VDGQQQQQGATKAGPTPSFSSTFSFGGSSGPSPALPQPTFGSAAQPAFGGAKPPTSFGAP
ASTQPAFGSTNTVFSFGTATTSSFGASTQTTSSGTGSSMFSSMTLAPFTFGSSTSAASSG
GFGASTAGPGTSSSTTAFSFGASQSGASSAATPFGAALNQNPLAPSSSTPFAFNVANTSE
NKSVFGGTSTPTFGQSAPAPGAGTVGSSLSFGTPATPAQSFVGAGPSFGPSTPSFSIGAG
SKTPGARQRLQARRQHTRKK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgggcggttatctgggcaggccgagctcccccgagcccccgcgccgggagcggcgggag
cccgcgggggcgtcgccacacctgctgagcccggcccgcaggctccacctcagggaccac
ctgactgctccaaaccgattctcattagctccacggaggaggtatcccattcagcaggca
cagtactccttgctggggaccctccccaccgtgtgctgggaaggctaccagaggaaaaac
gtgctctctccccgaaattctcacatgatctgtagccctgtgactgtgaggattgctcgc
ccagacctaccccgatcccccctggagccggtcatgaattcggccgtggtgaattcacca
tccagaaataccccagacccatgtgcaaaggaaaccgtgatgaacgcactcaaagagagt
cggaaaagggcggtggaggaagatgatcaaatcttctgtgatgcccaggaaaacaagcga
aggcgccatgacagtagcgggagtggacactcggcatttgaacccttggtggcaaatggg
gccccagcatctcttgttcccaagcctgggtctctgaagagaagcctcacgtcccagtgt
gcagaagacaacttgaataagagatcgcgcacctcttcgaccagctctttgaccaacacc
accccggggggcatccccagctccatccgcaatgccatcaccagctcctacagctccacc
aggggcttctcacagctgtggaagaggagtggccccagcacctcacccctctccagcccc
gcttcatctcggtcccagaccccggagaggcctgtgaagaaagctcgagaagaagagctt
catcagtctagctctttgacccccatgacctcagacaaggaatcacaggcagagaaggtg
accgatacccccacatggaagaaacagagctcttggagcaccccatccacctccgggagt
ggtgggaagcgcaaacgcaaagttcagctgttgccttcccggcgaggagaccagctcacc
ctgcccccacctccccaacttggttactccatcacggctgaggacctggacttggaaaag
aaggccgccttgcagtggtttaacaaagtcttggaggagaagacagaccctcctcctgct
tctgtggcagagagctcccctgcccctcggcccctttccttcacatcctcggagacggcc
acgtcctcgtcagccgctcctccagctgccagcgccaacctgctgctggacagtctgaag
aagatgcagagctccccgaacccggcggccctcacagatgcggctggagcagcccctgct
gcggctccctccccgctgaagcccgccagcccacccgctgcccccgggccctcagagccg
gggcccccagcagccacctcggtggcatccaagcccgtctcgaccttctccttgatgagc
cctgccaccacactcgctgctaccaccagcagcagcagccaggcccccccagctcctgtg
tccgagggctccagcaagcccctcaccagcccctcccccaagccaagccttctcttcgga
atgctgagtgcccctcctccaacatcctccgctcccactcccactcccgctcctgctccc
actcccactcctgctcctgctcccactcccacttctacttctactcccgctcctgctccc
actcccactcctacaacttcttcagctccttctcctgccacccccatgttcaaacccatt
tttggggctccccctaagatggagagtggggtttcaccggcggccccccccaccccgact
cctgcgtcctgtggctcagtcctctccacaactcccagcagctccactacaaccttcaag
cccatctttgggagcatgggcccaccctcctctctgcccttggcctcccccttcttgaag
cagccttcctcttcggcccccagcacggccgtcaccaccgccgtgctggcgcctctcttt
agcggcctccccagcgcccagtccgctgcggcccccgcccccaccaccaccgctgctgcc
gcctccacagggaccactgactctggtgccaagcccgcctttggcttcgggctgagcagc
ttggctggcactgcgggcgccgccgccacggccaccaccacgagcgccaccacaaccacg
cccactccctccctgtcacagcctttcctcttcggggccgcccctgccgctggctccagc
ttcaccccgtccaccggctccatgttccagtttaacaagcccgccgccaccacctccagc
accgccgccgcgaccaccgccaacacctttggtgccgtgcaggcgacccccagcggcact
ggtggctttgggttcggcgggagcgtcaccacggccgcgctgccgaccaccagccaagtg
acgttgacgttcggccccaccaccaccactgccgccttcagctccccctttggctcaagc
atcaagaccatgccgcccccgccctacccaggggccaccccgcagccagcttttgggagc
gtcgacgggcagcagcagcagcagggggccaccaaggcgggccccacgccaagcttcagt
agcacattcagcttcgggggctcatcaggccctagcccggccctcccccagcccaccttt
ggcagcgccgcccagccggcctttggcggggcaaagccccctacctccttcggcgccccc
gccagcacgcagccggccttcggcagcaccaacacggtcttctcgttcggcacggccacc
acctccagcttcggggccagcacgcagaccaccagcagtggcacgggcagctccatgttc
agcagcatgacgctggcccccttcaccttcgggagctccacgtctgcagccagcagtggg
ggcttcggggccagcacggccggccccggaaccagctcgagcaccacagccttcagcttt
ggagccagccagagcggggcgtccagtgccgccacccccttcggggctgccttgaaccag
aaccccctggccccaagctcgagcacaccctttgccttcaatgtggccaacacctctgag
aacaagtctgtgtttggaggcacctccacgcccacctttggccagagcgctccagcccct
ggagcgggcacggtgggcagtagcctttcctttgggaccccggccacgccagcccagagc
tttgtgggagcagggccgtcttttggaccatcgaccccttcgttttccattggtgcagga
tccaagaccccgggggcccggcagcggctgcaggcccggaggcagcacactcgaaagaaa
tag
DBGET
integrated database retrieval system
