Stereum hirsutum: STEHIDRAFT_160304
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Entry
STEHIDRAFT_160304 CDS
T03127
Name
(RefSeq) Ssl1-domain-containing protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
shs
Stereum hirsutum
Pathway
shs03022
Basal transcription factors
shs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
STEHIDRAFT_160304
09124 Replication and repair
03420 Nucleotide excision repair
STEHIDRAFT_160304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_160304
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_160304
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
STEHIDRAFT_160304
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
STEHIDRAFT_160304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
Tfb4
DZR_2
Motif
Other DBs
NCBI-GeneID:
18801680
NCBI-ProteinID:
XP_007307894
JGI:
Stehi1_160304
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDAGSDSDASIFDDPNPGLRSKNKGKQKAVDGKKDKLNDRAKEQAYAWEATYTRSWDAVQ
EDEGGSLTGAVQELMAKGRRRRLLAPAAAIRRTIIRHLVLLLDLSASMMDRDLRPTRFDL
SLEYAREFVTEWFDQNPLGQVGVVGMRAGLGERVGEMSGNPQDVLKALSERHKLEPTGEP
SLQNAIEMARSSMSHLPTHSSREILVIFGSLTTVDPGNIYDTLQSCIKDKIRISIVSLAA
EMKICRELCDKTGGQFGVAMNEGHFKDLLFELIPPPAQRAIARTTGGPGAANPAADLMMM
GFPTRLPDTSLPSLCVCHAELRSAGFLCPRCMSKVCDVPTDCDVCGLMIVSSPHLARSYH
HLFPVKPYAAVYVVLIHFVLHT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatgccggatccgactcagacgcgtctatattcgatgaccccaatcctggtcttcgt
tcaaagaacaaggggaaacaaaaggctgtggatggaaagaaagacaaattaaacgaccgg
gctaaggagcaagcctacgcctgggaggcgacctatactcgctcatgggatgctgtccaa
gaagatgaaggcggaagcctaacaggggcagtccaagagttgatggcaaaaggtcgaaga
cgaagactcctcgcgcccgccgctgctatacgacgtactatcatccgacatctggtctta
ctattggacctttcggcatcgatgatggatcgtgatttgaggccgacaaggtttgacttg
tcgttggagtatgcgagggagttcgttacggagtggttcgaccagaacccgttgggacag
gtgggtgtcgtgggcatgagggcagggctgggcgagagggttggcgagatgtctggaaac
ccacaggatgttctgaaagcgctttctgagcgccacaaactggaaccgactggcgaaccg
agtctccagaatgctatcgagatggcccgtagtagcatgagccaccttccaacacattca
tctcgagaaatccttgttattttcggctctttgaccaccgtcgatcccggaaatatatat
gatacattacaatcgtgcatcaaggacaagatcaggatatcaattgtttctctcgcagct
gagatgaaaatttgtcgcgaactatgtgacaaaactggaggtcaattcggcgtcgcgatg
aacgaaggtcacttcaaagaccttctcttcgaacttatccctccacctgcacaacgcgct
atcgctcgcactaccggaggtccaggcgcagccaaccccgccgcagacctcatgatgatg
ggtttccccacccgcctgcccgacacctcactcccaagcctctgcgtctgtcacgcagag
cttcgaagcgcggggtttttgtgcccgagatgcatgtcgaaggtgtgcgacgtgcctacg
gattgtgatgtctgtgggttgatgatcgtgagctcgccacatctggcgaggagttatcat
catctgttcccggtcaagccgtatgctgccgtgtatgtcgttcttatccattttgttctc
cacacctga
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integrated database retrieval system
