Stereum hirsutum: STEHIDRAFT_47956
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Entry
STEHIDRAFT_47956 CDS
T03127
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
shs
Stereum hirsutum
Pathway
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_47956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_47956
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
STEHIDRAFT_47956
Spliceosome [BR:
shs03041
]
Complex C
Other components
Step II factors
STEHIDRAFT_47956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
18804857
NCBI-ProteinID:
XP_007298084
JGI:
Stehi1_47956
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MPADLQAKIFDPTSDGRRKVIVATNIAETSLTVDGILYVVDAGFSKLKVYNPKVGMDALQ
ITPISQANANQRTGRAGRTGSGFCYRLYTEMAYRNELFENTIPEIQRTNLANTVLLLKSL
GVKNLLEFDFMDPPPQANILNSMYQLWVLGALDNVGDLTPIGRKMSEFPMEPSMAKMLIT
SVEYKCSSEMLTIVSMLSVPSVFYRPKERMEEADAAREKFNVPESDHLTLLNVFNQWKSH
GYRDDWSMKHFLHPKLLRKAREVRVQLEDIMKFQKMDIVSAGTDFDMIRKAITAGYFHQA
ARVKGIGEFVNIRSGLPTHLHPTSALYGLGYTPSYVIYHELILTSKEYMTQVTAVDPYWL
AELGSVFYSVREKNFDERGNRRQADREFSRRAELETEMAKQREATARQAKEEAETVKIAS
SSASKIVVPGTPRHTGIGAGARVTQTPRRRVGI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagatctacaggccaagatattcgaccctacgtcggacgggcggcgaaaggtc
attgtggctacaaatattgcagagacttcattgactgttgatggtatcctctatgtcgtc
gacgctggtttctccaagctcaaagtctacaatcctaaggtcggcatggatgctctacag
atcacacctatttcccaagcgaacgcgaaccagcgtactgggcgtgcaggacgtacggga
agcgggttttgctacaggctgtacacggagatggcttataggaatgagctgttcgaaaac
acgatcccggaaattcaaagaacgaacttggcgaatacagtattgctgttgaaaagtctt
ggagtcaagaatcttttggagttcgatttcatggatccacctcctcaggccaacattctc
aactccatgtaccagctctgggtacttggtgccctcgacaacgtcggcgacctcacgcct
attggtcgcaagatgtcggaatttccgatggaaccgtccatggcaaagatgctcatcacc
tccgtcgagtacaagtgctcgtctgagatgttgaccatcgtgtcgatgctttccgtcccg
agtgtgttctataggccgaaggaaaggatggaagaagcggacgcggcaagggagaagttc
aatgtccctgaaagtgatcatctgacgctgctgaacgtgttcaatcagtggaagagtcat
ggttaccgtgatgattggtccatgaaacacttcctacaccccaagctcctcaggaaagct
cgtgaagtccgtgttcaacttgaggatatcatgaagttccagaagatggacatcgtctcc
gctggtaccgactttgatatgatccgcaaagccatcaccgcgggatacttccaccaggcc
gctcgtgtcaagggtatcggcgagttcgtgaatatacgctccggtctaccaacacatttg
cacccaaccagtgcattgtatgggctcggatacaccccgtcatatgtcatctaccacgag
ctgatcctgacctcgaaggagtacatgacccaggtcacagccgttgacccctattggctt
gccgagctcggttctgtgttctattccgtccgtgagaagaacttcgatgagcgaggaaac
cgccgtcaagcagacagagaattctccaggcgtgcagaactcgagacggagatggccaaa
cagcgtgaagcaactgcgcggcaggcgaaggaggaagcagagacggtcaagattgcaagt
agttcagcttcgaagattgtcgttcccggaactccaagacatacgggcatcggggcagga
gccagagtcacgcagacaccgaggagaagagtgggtatttag
DBGET
integrated database retrieval system
