Stereum hirsutum: STEHIDRAFT_55436
Help
Entry
STEHIDRAFT_55436 CDS
T03127
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
shs
Stereum hirsutum
Pathway
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_55436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_55436
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STEHIDRAFT_55436
Spliceosome [BR:
shs03041
]
Complex A
U2 snRNP components
U2 related factors
STEHIDRAFT_55436
Complex B
STEHIDRAFT_55436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NuDC
Motif
Other DBs
NCBI-GeneID:
18805437
NCBI-ProteinID:
XP_007302393
JGI:
Stehi1_55436
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MNDGGAAADDTGDGAGDDELDTTELNPEDILALAAKKAKKKELAAVDHSRMSYEPFRKEF
YMPPPDIAAMTDEEADLLRLELDSIKIRGVDCPRPVTKWSHFGLPTSVLDVIKRLNYAAP
TSIQAQAVPAIMSGRDVIGVAKTGSGKTVAFLLPVFRHIKDQRPLEQMEGPIAIIMTPTR
ELAVQIHRDCKPFLKVLNLRAVCAYGGSPIKDQIADMKKGAEIIVCTPGRMIDLLTANSG
RVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTLLFSATFPKQMDSLARKIL
RKPLEITVGGRSVVAAEIDQIVEVRPEETKFNRLLEVLGQMYNEDPEARTLIFVDRQEAA
DNLLRELMRKGYLCMSLHGGKDQVDRDSTIADFKAGVVPIVIATSVAARGLDVKQLKLVI
NFDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQDRYSVDIYRALKASNANVPQELEEL
ANGFLDKVKAGKAHAAGSGFGGKGLDRLDKERDAREKAERKAYGEPDEEKAAAEGEAAAG
GTTTAAKKEPADDMTFGNFKVEIKRGPAPDSSKGQLGVNPDSTDFHAIVPINDYPQKARW
RVTNKETMVQLIDMTGASVTNKGIFYEPNKEPPPEGPPKLHLLIESNEEWRVEHAVREIK
RLLIEASAAALQAEMRNPTATSGRYSVV
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatggtggtgccgctgcagatgatacgggtgacggagcgggtgatgacgagttg
gacactacagagctcaatccggaggatatcctcgctttggccgcgaagaaggcgaagaaa
aaggagcttgccgctgtcgaccactctcgaatgtcttacgagcctttccgcaaggagttc
tatatgcctccacccgacatcgccgccatgacagacgaggaagcagacctacttcgtctc
gaactcgatagcatcaaaattcgtggtgtcgattgcccaaggcccgtaacaaagtggagt
cactttgggctacccaccagcgtcctcgacgttatcaaaaggctcaactacgcggcacct
acttcgattcaggctcaagccgttccggcaataatgtctggccgagatgtaattggtgtc
gccaaaacgggctctggaaagacggtcgctttcttgcttcctgtcttccgtcacatcaaa
gaccagcggccactagagcagatggagggaccaattgcgatcatcatgacacctacacgg
gagttggccgtgcagattcacagggattgtaagccattcttgaaagttttaaacttaagg
gctgtttgcgcgtacggtggctctcccatcaaggaccagatcgcagacatgaagaaaggg
gccgaaattatcgtttgcacgcctggtcggatgatcgatctcctcaccgccaattctggc
cgtgtcaccaacctcaagcgcgtaacctacctcgttctcgacgaagctgaccgtatgttc
gacatggggtttgagccacaggtcatgaagatcgttaataacattcgtcccgaccgtcag
accctccttttctccgctactttccccaaacagatggactccctcgcccggaagattctt
cgcaagcctctcgagatcactgtaggcggtcgatcggtcgtagcagctgagatcgaccaa
atcgtcgaagttcgtcccgaagaaacgaagttcaatcgtcttctcgaggtccttgggcag
atgtacaatgaagatccagaggcacgaactttgatcttcgtcgaccggcaggaggctgct
gacaacttacttcgcgagctcatgcggaagggttatctctgcatgtcgcttcacggaggg
aaggaccaagtagacagggactctaccatcgctgacttcaaagccggagtcgttcccatc
gtcatcgccacgtcagtcgctgcccgaggcttggatgtcaagcaactcaaactcgtcatc
aatttcgacgcacccaaccatatggaagattatgtgcatcgcgctgggcggactggtcgg
gctgggaataaggggacgtgtatcacattcatcactcctgagcaggaccggtattctgtc
gatatctatcgcgctttgaaggctagcaatgctaatgtcccacaggagcttgaagaactt
gccaatggtttcttggacaaggtcaaagccggcaaggcacacgcggccgggtctgggttc
ggaggtaaaggccttgatcgccttgacaaggaacgtgatgctcgcgagaaagccgagcgg
aaagcgtacggcgaaccagacgaggagaaggcagcagctgagggtgaggcggcagctggc
ggaacgacgacagctgcgaagaaagagccagccgacgatatgaccttcgggaatttcaaa
gtcgagatcaaacgcggcccggccccggattcatcgaaaggccaacttggggtcaacccg
gattcgacggacttccatgctattgtgcctatcaacgactacccccagaaggctagatgg
agagtcacgaacaaggagacgatggtgcagctcatcgatatgacgggcgcttcggtgacc
aacaagggtatattctacgagcccaacaaggaaccaccgcccgaaggtcctccgaaactg
caccttctcatcgagtccaacgaagaatggagggtcgagcatgccgtgcgcgagatcaag
cgtttgctcatcgaggcgtcggccgccgctctacaggcagagatgcggaatcccacagcg
acatctgggcgttacagcgtcgtttag
DBGET
integrated database retrieval system
