Salinicoccus halodurans: AAT16_11525
Help
Entry
AAT16_11525 CDS
T03940
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
shv
Salinicoccus halodurans
Brite
KEGG Orthology (KO) [BR:
shv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shv03021
]
AAT16_11525
Transcription machinery [BR:
shv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAT16_11525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_16
GerE
HTH_23
HTH_3
KORA
IF2_N
HNF-1_N
TnsD
HTH_37
OrgA_MxiK
Motif
Other DBs
NCBI-ProteinID:
AKG74761
UniProt:
A0A0F7HNK4
LinkDB
All DBs
Position
complement(2255572..2256348)
Genome browser
AA seq
258 aa
AA seq
DB search
MEKQSSIDKGLTPDDINALIRSHQEEGDQAAQTRLVEHYRKLIESLAYRYSKGKSHHEDL
VQVGMVGLLGAIKRFDASFDRRFEAFLVPTVVGEIKRYLRDKTWSVHVPRRIKEIGPKIK
NANDELTNRLERSPKISEIAEHLEVSEEDVLEAMEMGQSYNALSVDHSIEADKDGSTVTL
LDVMGQSDDNYDLSEKRLILEKVLPILSEREREIIQFTFMEGLSQKETGERIGLSQMHVS
RLQRTAINKLRQAVSKDE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaatcgtcaatcgataaaggactcacaccagatgatatcaatgcactgata
cgaagccaccaggaagaaggcgaccaggctgcccagaccagactagtggaacactatcgg
aaactgatagaatcgctggcgtacagatattcaaaagggaaaagtcatcatgaagatctg
gtgcaggtcggcatggtagggctgcttggtgccatcaaaaggtttgatgcatcttttgac
cgcagattcgaagcatttctggttccgacggtggttggtgagatcaaacgctatctcagg
gacaaaacctggagtgtccatgtaccacgacgcataaaagaaatcggtccaaagataaaa
aatgcgaatgatgaactgacgaacaggctggagcgctcccctaaaatcagcgaaattgca
gagcatctcgaggtatcggaagaagatgttttggaagcgatggagatgggacagagctac
aatgcactcagcgtcgatcattccatcgaagcggacaaagatggatcgacagtgactctg
cttgacgtaatgggacaatcagatgataactatgatctttccgagaagcgcctgattctg
gaaaaagtgcttcccatattgtctgaacgtgaacgtgagatcatccaatttacgtttatg
gaaggcctgagccaaaaggaaacaggtgaacgtatcggtttgagtcagatgcatgtttca
aggctgcagcggacggcaatcaataagctgcgccaggcagtgagcaaagatgaatag
DBGET
integrated database retrieval system
