Schistosoma haematobium (urinary blood fluke): MS3_00003275
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Entry
MS3_00003275 CDS
T05004
Symbol
LIG1_1
Name
(RefSeq) tRNA ligase, variant 2
Organism
shx
Schistosoma haematobium (urinary blood fluke)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Cnd1
Salp15
Motif
Other DBs
NCBI-GeneID:
24597104
NCBI-ProteinID:
XP_035588593
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Position
ZW:complement(31125129..31143767)
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AA seq
785 aa
AA seq
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MPNKSSEYVHNDINFEESDAEIPSKLPDLVHQPISNPTSEDKLLQNVTDTRTKDKFKDLS
ESNLVRFQCAKIEAGNILSRSNVNEKSSRSPDKLVTRYDPSKTDYHPIHDCNWREGESVP
YLSLARTFECIEATSGRIKITEMLCNFFRSVGLLSSFDLTSCVYLCLNQLGPAYEGMELG
VGETVLLKALAATTGVGIEHMRSSLKQHGDLGVVAETIRSRQKILSAPKPLTISLVFSKL
KDIASMSGNSAQNKKVEIIRSLLVACRESETKYIIRSLSGKLRIGLAEQTVLTALGQAVA
MTPFHFKVGDKSTRVVNASNGMSNEHWKVTMDTAVANVKRAVCPDYSRLIKALLTSSHES
LDQICTITPGIPLKPMLASPTHGIYEILKRFEECDFTCEYKYDGERAQIHILPSGASHVY
SRNQEDNTTKYPDIVNNLMSRVLPESKLTPHAIELLSEIVKDNKRQVQSNGIIGNKLESC
IIDSEVVAWDRLAGHILPFQVLSTRKRKDVDESTLKVQICIYVFDILFINGVSLIEQPLR
IRREILREVFPRISGEFMMATSLDSSDTDEIATFLDEAIKGNCEGLMIKTLDHNSTYEIA
KRSHSWLKLKKDYLEGVGDTLDLVVIGGFHGTGKRAGRYGGYLLACYDPDTEEYQTICKI
GTGMKDDELASFSEFFKNHVTDKAKPYYQYTISLIPDQWFEPVQVWEVKAADLSISPGHK
AAAGLADPQKGISLRFPRFVRIRDDKKPEDATTAQQVYELYQSQEQIKNQHGNIQTGNND
DEDMY
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcccaataaaagtagtgaatatgttcataacgatattaattttgaagaaagtgatgca
gaaatcccttctaaattacctgatttagtacatcaaccaataagtaatcctacaagtgag
gataaattgttacagaatgtgactgatacaagaactaaagacaaattcaaggacttaagt
gagtctaatttagtccgttttcagtgtgcgaaaattgaagcaggcaatattctaagcaga
tcaaatgttaatgaaaagtcgtcacggagtcctgacaaactagttacccgttacgacccc
agcaaaacggattatcaccctatccatgattgcaactggcgagaaggtgaaagtgtccct
tatttgtcattggcgagaacatttgagtgtattgaggccacatctggcagaataaaaata
acagaaatgctgtgcaatttttttcgctcagtcggtttgttgtcttcatttgatttgaca
agctgcgtttacctatgcctcaaccaactgggacccgcatatgaagggatggaactaggc
gtgggggagacagtcctattaaaggctttggccgcaactacaggtgttgggattgaacat
atgcgttcgagtttgaagcaacatggtgatcttggggttgtcgccgaaactatcagatca
cgccagaaaatcctgtcagctccgaaaccattgaccatttctctagtattttctaaactg
aaagatattgcttcaatgtctggaaattcagctcaaaacaaaaaggtggaaattattcgc
tcgcttctagtggcttgtcgagaatctgaaactaaatatattatacgtagtttatcagga
aaattgcgtattggcttagctgaacaaacggtgctcacagctcttggtcaggctgtggct
atgacgccatttcattttaaagtcggtgataaaagcacgcgagtagtcaatgcttctaat
ggtatgtctaatgagcactggaaagttacaatggatactgcagttgcaaatgttaaaagg
gccgtttgtccagactacagccgtcttataaaagctcttttaacaagtagtcatgaatcc
ctggatcaaatatgcacaatcactccaggtattcctctaaaaccaatgttagcttctcct
acacatggaatatacgaaattttaaagaggtttgaagaatgtgatttcacttgtgaatat
aaatatgatggtgaaagggctcaaattcatattctcccttcaggtgccagtcacgtgtat
tcacgtaatcaagaagataatacgacaaaatatcctgatatcgtaaataatctgatgtct
agggttctgccagagtctaaactaacgcctcatgcaattgagctactcagtgaaattgtt
aaagataataaaagacaagttcaatcaaatggtataattggaaacaaactggagagttgt
attatcgactcggaagttgtagcttgggatcgtttagctggacatattttaccattccaa
gttctatcaacgcgaaagcgtaaagatgtagatgaatctacactgaaagtacaaatatgc
atttatgtattcgatatactttttataaatggtgtatctttaattgaacagccattacgc
atacgtcgagaaatacttcgagaagtatttccgcgcatttctggagagttcatgatggca
acctctcttgattcatctgatacagatgagatcgcgacttttcttgacgaagccatcaaa
ggtaattgtgaagggttaatgataaaaacactggatcataattctacctacgaaatcgct
aaaagatctcatagctggttaaaattgaaaaaagactatttagaaggtgttggtgataca
ttggatttagtggtgataggtggatttcatggaactggtaaacgtgctggtcgttacggt
ggttacttgctggcatgctatgacccagatacagaagaataccagacaatatgcaaaatt
ggtacaggaatgaaagatgatgaattggcttcattttcggagtttttcaagaaccatgta
actgacaaagcaaaaccttattatcaatacacaattagtttaattccagaccaatggttt
gagcctgttcaagtttgggaagtaaaggcagccgatttgagtatatcacctggacacaaa
gccgctgctggtttagcggatccacaaaaaggtatttcactgagattcccgaggttcgtt
cggattcgagatgacaagaagcctgaagacgcgacaacagcccaacaagtttatgaactt
tatcaaagtcaagagcagataaagaatcagcatggcaatatacaaacaggcaacaatgat
gatgaagatatgtattga
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