Schistosoma haematobium (urinary blood fluke): MS3_00010812
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Entry
MS3_00010812 CDS
T05004
Symbol
GTF2H4_1
Name
(RefSeq) General transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03022
Basal transcription factors
shx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MS3_00010812 (GTF2H4_1)
09124 Replication and repair
03420 Nucleotide excision repair
MS3_00010812 (GTF2H4_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shx03021
]
MS3_00010812 (GTF2H4_1)
03400 DNA repair and recombination proteins [BR:
shx03400
]
MS3_00010812 (GTF2H4_1)
Transcription machinery [BR:
shx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MS3_00010812 (GTF2H4_1)
DNA repair and recombination proteins [BR:
shx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MS3_00010812 (GTF2H4_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
75578266
NCBI-ProteinID:
XP_051068172
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All DBs
Position
2:32868995..32879845
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AA seq
486 aa
AA seq
DB search
MGVHSYSSLFEYLKNVGVHMLDELYTHPPTCLVVFRELPELAKHFVMRLLFIEQPIPKSI
VSGWVEKGSSALLNDSCKALTDLRIWHSTDSNVSRGSWSLNKKYQESIRISLFGGGKPLL
GDLGIVTNDKYSKSVDFLKSYAAERWDAILHFMVGSESAEVGSVVKDVLLLSNLMKCEGN
DCPIGITKHGFHFLLMSRQFQVLVFILHYFDYLKENSKNLVGALQFVFQLSFLCPTKSYP
VEALSTAQQEVLQHMRELGLAYQRKRTAPRFYVTPLALDVAGGHTTFLESKSGGWGPQLG
VIPTGVSKTDPTDSNKMFSQISVSNSSDVGYILLETNFRLYAYTDSPLRTALLSLFSKIR
ARFPNLVVADITRDSVREALIRGITANQILSFLTTNAHPDMLLQNPILPPTLTDQIRLWE
LERDRFLFQEGCLYEQFSRNTDFEMVRDYAKNIGVLLWENPERRLMVVSKAGHEDVRKFW
KHKRPS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccactcatattcatctttgtttgaatatctcaaaaatgttggtgttcatatg
cttgacgaactgtacactcatcctccaacatgtcttgtcgtttttagagaattacctgaa
ctagcgaaacattttgtcatgcgacttttatttattgaacaaccaataccaaaatccatt
gtctctgggtgggttgaaaagggttctagtgcacttctaaatgactcatgtaaagctttg
actgatttgagaatatggcattctacagacagtaatgtttctcgaggctcttggtcgtta
aataaaaagtatcaagagtcgattcggatatcactgtttggaggtggaaaacccttactt
ggagatttaggcatagtgacaaacgataagtactcaaaaagtgttgactttttaaaatcg
tatgcagctgaacgttgggatgctatacttcactttatggtaggttctgaatcagcggaa
gttggaagtgttgtgaaggatgtccttttattgtccaacttaatgaaatgtgaaggtaat
gattgtccaatcggtatcacaaagcatgggttccatttcttgcttatgagtcgacagttt
caagtgctagttttcatcctgcactactttgactacttaaaggaaaatagtaaaaatcta
gttggagccctacagttcgttttccaacttagttttttgtgtccgacaaagagctatcca
gtagaggcactgagtactgcccaacaggaagtattacaacatatgcgcgaactcggctta
gcttatcaacgaaagcgtacagcgcctcgtttttatgtaactcctcttgctttggatgta
gctggaggtcatactactttcttggaaagtaaatcaggtggatggggtccacaattagga
gttattcctactggtgtctcaaaaacagatcccaccgatagcaacaaaatgttttcgcaa
atttcagtatcgaattcttccgatgttggttatattttgctagaaaccaatttccgacta
tacgcctatactgattcaccgcttcgtaccgctcttcttagtttatttagcaaaatacgt
gcacgttttcctaatcttgttgttgctgatataactcgtgactcagttcgtgaagcatta
attcgtggaataactgcaaatcagattctatctttcttaacaaccaatgcacatccagat
atgttattacagaatcctatattaccgcctactttaaccgatcaaatacgactatgggaa
ttagaacgagatagatttctatttcaagaaggctgtttgtatgaacagttctctcggaat
acagattttgaaatggttcgggattatgctaaaaacattggtgttttactctgggaaaat
cctgaacgaagacttatggttgtgtctaaagcaggtcatgaagatgtacggaaattttgg
aaacataaacgtccatcctaa
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integrated database retrieval system
