Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5522
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Entry
SHJG_5522 CDS
T02063
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00250
Alanine, aspartate and glutamate metabolism
shy00410
beta-Alanine metabolism
shy00430
Taurine and hypotaurine metabolism
shy00650
Butanoate metabolism
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01120
Microbial metabolism in diverse environments
shy02024
Quorum sensing
Module
shy_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SHJG_5522
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SHJG_5522
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SHJG_5522
00430 Taurine and hypotaurine metabolism
SHJG_5522
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SHJG_5522
Enzymes [BR:
shy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
SHJG_5522
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AEY90789
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All DBs
Position
complement(6309620..6311026)
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AA seq
468 aa
AA seq
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MALHRGPDKHEERTMSVNPFFGEANPVGGMTEAPPTHRLPDAALPPSTAYQLVHDELMLD
GNSRLNLATFVTTWMEPQAGVLMDECRDKNMIDKDEYPRTAELERRCVAMLADLWNAPDP
SAAVGCSTTGSSEACMLAGMALKRRWAKRNADRYPGARPNLVMGVNVQVCWEKFCTFWEV
EARTVPMEGDRFHLDPQAAAELCDENTIGVVGILGSTFDGSYEPVADLCAALDALQERTG
LDIPVHVDGASGGMVAPFLDEDLVWDFRLPRVASINTSGHKYGLVYPGVGWALWRDKEAL
PEELVFRVNYLGGDMPTFALNFSRPGAQVVAQYYTFLRLGREGYRAVQQSTRDVATSLAS
RIEALGDFRLLTRGDQLPVFALTTADHVTSYDVFDVSRRLREGGWLVPAYTFPANREDLS
VLRIVCRNGFSHDLADLFLDDLARLLPELRRQPHPLTRDKEAATGFHH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcacagaggtcccgacaagcacgaggagcggacgatgtcggtcaacccgttc
ttcggggaggccaaccccgtcggcggcatgaccgaggcaccgcccacgcaccggctcccg
gacgccgcgctgccgccgtccacggcgtaccagctggtgcacgacgagctgatgctggac
ggcaactcccggctcaatctggccaccttcgtcaccacctggatggaaccgcaggccggg
gtgctgatggacgagtgccgggacaagaacatgatcgacaaggacgagtacccgcgcacg
gccgagctggagcggcgctgcgtggcgatgctcgcggacctgtggaacgcgccggacccg
tcggcggccgtcggctgttcgacgaccgggtcgagcgaggcctgcatgctcgccgggatg
gcgctgaagcggcgctgggcgaagcggaacgccgaccgctatccgggcgcgcggcccaat
ctggtcatgggcgtcaacgtccaggtgtgctgggagaagttctgcaccttctgggaggtg
gaggcccggacggtcccgatggagggcgaccgcttccatctggacccgcaggccgccgcc
gagctgtgcgacgagaacaccatcggggtcgtcggcatcctcggctcgaccttcgacggc
tcctacgagccggtcgccgacctgtgcgcggccctggacgccctccaggagcggaccggg
ctcgacatcccggtgcacgtggacggcgcgtccggcgggatggtggcgcccttcctggac
gaggacctggtgtgggacttccgcctgccgcgcgtggcgtcgatcaacacctccgggcac
aagtacgggctggtgtatcccggcgtcggctgggcgctgtggcgggacaaggaggcgctg
cctgaggagctggtcttccgggtgaactacctgggcggcgacatgccgaccttcgcgctg
aacttctcccggcccggtgcccaggtggtggcgcagtactacacgttcctgcggctgggc
cgggagggttaccgggcggtgcagcagtcgacgcgggacgtggcgacctcgctcgcctcc
cggatcgaggcgctcggcgacttccggctgctcacgcgcggggaccagctccccgtgttc
gcgctgaccaccgccgaccacgtcacctcgtacgacgtcttcgacgtctcccggcggctg
cgcgagggcggctggctcgtgcccgcctacaccttcccggcgaaccgtgaggacctgtcc
gtgctgcggatcgtgtgccgcaacggcttctcgcacgacctggccgacctgttcctggac
gacctggcccgcctgctgccggagctgcgccgccagccgcaccccctgacccgcgacaag
gaggcggccaccggcttccaccactag
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