Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_6988
Help
Entry
SHJG_6988 CDS
T02063
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00521
Streptomycin biosynthesis
shy00523
Polyketide sugar unit biosynthesis
shy00541
O-Antigen nucleotide sugar biosynthesis
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SHJG_6988
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SHJG_6988
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SHJG_6988
Enzymes [BR:
shy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SHJG_6988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEY92255
LinkDB
All DBs
Position
complement(7964264..7964815)
Genome browser
AA seq
183 aa
AA seq
DB search
MKATEVPQIAGAYLFEPTPYADERGFFCRTFDADVVRSVGLDPCAFVQDSVSRSVRGVLR
GLHLRSGAGEAKLVRCSYGRIFDVVVDLRPHSPTYLGRAFFELSGETQATVYVPAGCAHG
FQALTDTADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPVASMSRRDREAPSLAEVLKH
TEG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgaccgaagtcccccagatcgccggcgcgtacctgttcgagccgacgccgtac
gccgacgagcgcggcttcttctgccgcaccttcgacgccgacgtggtccgctcggtgggc
ctcgacccgtgcgccttcgtccaggacagcgtgtcccgctcggtccggggcgtgctccgc
ggcctgcacctgcgctccggcgccggcgaggccaagctggtgcggtgctcgtacgggagg
atcttcgacgtcgtcgtggacctgcggccccactcgccgacgtacctgggccgggccttc
ttcgagctgtccggcgagacgcaggcgaccgtgtacgtgccggcggggtgcgcgcacggc
ttccaggcgctcaccgacaccgccgacacctcgtaccggatcgaccgcccgcacgatccg
gccgaggacgtgacgatcgccttcgacgatccggagctcgccattccgtggccgctgccg
gtcgcatcgatgtcccggcgggaccgggaggcgccgagcctcgccgaggtcctgaagcac
acggaagggtga
DBGET
integrated database retrieval system
