Sphingobium xenophagum: CJD35_00585
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Entry
CJD35_00585 CDS
T05146
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shyd
Sphingobium xenophagum
Pathway
shyd01501
beta-Lactam resistance
shyd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CJD35_00585
01503 Cationic antimicrobial peptide (CAMP) resistance
CJD35_00585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_00585
01504 Antimicrobial resistance genes [BR:
shyd01504
]
CJD35_00585
Transporters [BR:
shyd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CJD35_00585
Antimicrobial resistance genes [BR:
shyd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CJD35_00585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ASY43118
UniProt:
A0A249MP57
LinkDB
All DBs
Position
I:complement(110640..113792)
Genome browser
AA seq
1050 aa
AA seq
DB search
MARYFIDRPIFAWVIAIVIMLAGLLAIRALPVAQFPEIAPPTVGIATSYPGANAQTLEST
TTQIIEQQLKGIDNLRYFSSTSDSAGNLNITLTFEQGTDADIAQVQVQNKLAQATPLLPQ
EVQQQGLRVTKSTASFLMVMAVYSDDGIHDQQDAGDFIASSLQDPISRVTGVGDTQLLGA
QYAMRVWLDPYKMANLGVTTGDVKAAIQAQNAQVSAGQIGGTPSPKGQALNATVTAQSRL
RTPEEFRAIRLRSNSDGSVVLLSDVARVELGSENYSFGAKFNGHPAAGFGIKLAPGANAL
DTVTDVKAQIKTLSRNFPSWVKYDFPVDNSTFVKLSVEQVIHTLIEAVLLVFVVMFLFLQ
NWRATLIPTIAVPVVLLGSLAILHAAGFTINTLTLFGMVLAIGLLVDDAIVVVENVERLI
QDEGLSPKEAAKKSMDEISGALIGIGLVLSAVFLPMAFFGGSTGVIFRQFSITIVSSMIL
SVLVALILTPALCATILKPARHDHATQKGFFGWFNRTFDKGVVRYGQGVEKVERRWGRTM
LVFGLVTVGMAVIFLRLPTGFLPEEDQGRIINQISLPTGATIEETERTLDRVRDYYLTQE
KDNVAAVFTISGFGFVGQGQNVGIAFVPMKDWKLRKGQDNSVMAIAERANAALHKISAGM
VIAFVPPAVQELGNASGFDFQLLDLGSVGHEKLLEARNQLLGMAMQDKRLAQVRPNGLED
SAQLKLTVDQAAAGALGIAQADVNDTISTNLGSAYVNDFIDRDRVKRVFVQADAPFRTTP
DSIGALHVRGSSGVMAPLSAFSTTEWVTGPARLERFNGVPSMNIQGAPAPGVSSGEAMKA
MEEYAAKLPAGIGYSWNGISYEERTSGGQAPYVYALSMLIVFLCLAALYESWSVPIAVML
VVPLGVLGAVIAATLAGLNNDIYLQVGLITTIGVSAKNAILIVEFAEEKMREGMSPGAAA
LEAGKLRLRPILMTSFAFIFGVLPLALSTGAGAGGQNAIGWAVVGGMLSATVLAIFFVPV
FFTVVKRLFREHKTHDAAQEQATPATPQEA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctattttatcgaccggcccatctttgcatgggtcatcgccatcgtcatcatg
ctggccggtctgctcgccatcagggcgctgcccgtcgcgcaatttcctgaaatcgcgccg
cccacggtcggcatcgcaaccagctatccaggtgccaatgcccagacgctggaaagcacg
acgacccagatcatcgagcagcagctcaagggcatcgacaatctgcgctatttctcgtcc
accagcgatagcgcgggcaacctgaacatcacgctgacgttcgagcagggcaccgatgcg
gacatcgcgcaggtgcaggtgcagaacaagctggcgcaggcgacgccgctcctgccgcag
gaagtgcagcaacaggggctgcgcgtcaccaaatcgaccgccagcttcctgatggtgatg
gcggtctattccgatgacggcatccatgaccagcaggatgcgggcgactttatcgcgtcg
tcgctgcaagatccgatcagccgcgtcaccggggttggcgacacccagttgctgggtgcg
caatatgccatgcgggtgtggctggacccctacaagatggccaatctgggcgtcacgacg
ggcgacgtgaaggccgcgatccaggcgcaaaatgcgcaggtatcggcgggccagatcggc
ggcacgccatcgccaaagggccaggcgctcaacgccaccgtcaccgcccagtcgcgcttg
cgtacgccggaggaattccgcgccattcgcctgcgcagcaacagcgacgggtcggtcgtc
ctgctgtctgacgtcgcgcgggtcgaactgggatcggaaaattacagtttcggcgcgaag
ttcaacggccatccggccgccggtttcggcataaagctggcgccgggcgccaacgcgctg
gacacggttacggacgtcaaggcgcagatcaagacgctgtcgaggaatttcccgtcctgg
gtcaaatatgacttcccggtcgacaattcgacctttgtgaaactgtcggtcgaacaggtt
atccacacgctgatcgaggcagtgttgctggtgttcgtcgtcatgttcctgttccttcag
aactggcgcgcgacgttgatccccaccattgccgtgccggtcgtgctgctgggatcgctc
gcgatcctgcatgcggcgggctttaccatcaacacgctgaccctgttcggcatggtgctg
gcgatcggcctgctggtcgacgacgccatcgtcgtcgtcgaaaatgtcgagcggctgatt
caggatgaaggcctcagtcccaaggaagcggcgaaaaagtcgatggacgagattagcggc
gcgctgatcggcatcggcctggtgctgtccgcggtgttcctgcccatggcattctttggc
gggtccaccggcgtcatcttccgccagttttcgatcaccatcgtttcgtccatgatcctg
tcggtgctggtcgcgctgatcctgacgcccgcgctgtgcgccacgatcctgaaaccggcc
cggcatgaccatgcgacgcagaagggctttttcggctggttcaaccgcacgttcgacaag
ggcgttgtccgctatgggcagggcgtcgagaaggtcgagcggcgctggggccggaccatg
ctggtctttggcctggtgaccgttggcatggcggtcatcttcctgcgcctgccgaccggc
ttcctgcccgaagaggatcagggccgcatcatcaaccagatttcgctgcccaccggcgcg
acgatcgaggagacggagcggacgctggaccgggtgcgcgactattatctgacgcaggaa
aaggacaatgtcgcggcggtctttaccatttccggcttcggctttgtcgggcagggccag
aatgtcggcatcgccttcgtgccgatgaaggactggaagctgcgcaaggggcaggacaac
agcgtcatggcgatcgccgagcgcgccaatgccgccctgcacaagatttccgcaggcatg
gtcatcgcgttcgtgccgccagcggtgcaggaactgggcaatgcgtcgggtttcgacttc
cagttgctggaccttggcagtgtgggccatgaaaagttgctggaggcgcgcaaccagttg
ctgggcatggcgatgcaagacaagcgattggcgcaggtgcggcccaatggcctggaggac
agcgcacagttgaagctgaccgtcgatcaggcggcggcgggtgcgctgggcatcgcgcag
gcggacgtcaacgacacgatcagcaccaatctgggcagcgcctatgtcaatgacttcatt
gatcgcgaccgggtgaagcgcgtgttcgtgcaggccgacgcgccgttccgcaccaccccc
gattcgatcggggcgctgcatgtccggggcagcagcggcgtcatggcgcccctgtcggcc
ttctccacgacggaatgggtcacgggtccggcccggctggagcggttcaacggcgtgccg
tctatgaacatacagggcgcgcccgcgcccggcgtgtcgagcggcgaggcgatgaaggcg
atggaggaatatgccgccaaattgcccgccggcatcggctatagctggaacggcatttcc
tatgaggaacgcacgtccggcgggcaggcgccctatgtctatgctctgtcgatgctgatc
gtgtttctgtgcctggctgcgctgtatgaaagctggtcggtgccgatcgcggtgatgctg
gtggtgccgctgggcgttttgggcgcggtgatcgcggccacgctggcgggattgaacaac
gacatctaccttcaggtcggcctgatcacgacgattggcgtgtcggcgaagaatgcgatc
ctgatcgtggaattcgccgaagagaagatgcgtgagggcatgtcgccgggcgcggccgcg
ctggaggcaggcaagctgcgtctgcggccgatcctgatgaccagctttgccttcatcttc
ggcgtgctgccgctggcgctgtcgaccggggcaggggccggtggccagaatgcgatcggc
tgggccgtggtcgggggcatgttgtccgcgacagtgctggcgatcttcttcgtgccggta
ttcttcaccgtggtgaagcggctgttccgtgaacataagacccatgatgcggcgcaagag
caggcaacgcccgccacgccgcaggaggcataa
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