Sphingobium xenophagum: CJD35_08355
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Entry
CJD35_08355 CDS
T05146
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shyd03009
]
CJD35_08355
Enzymes [BR:
shyd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CJD35_08355
Ribosome biogenesis [BR:
shyd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CJD35_08355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASY44449
UniProt:
A0A249MTH8
LinkDB
All DBs
Position
I:1724475..1725842
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AA seq
455 aa
AA seq
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MKGRPPGKGDAPRGRKPATPGKSFGKPSGAPGRARGGAKAATARKGEGGKPASKPPFKSG
PKKPAAKPAAAKAAPVVQAAAPKPSAAKGVSLDVRQYRVHADDDGIRLDRWFQRHLPDVG
FNIVSRWSRTGQLRVDGARAAPGDRIAEGQMIRVPPAEAKAAPSERPARRVPVIDLTPDE
IAYAQEMVIHRDAQAIVINKPPGLATQGGTKTDEHVDRLLDGLIFNAESRPKLVHRLDKD
TSGALLLARSSRAAAHFAKAFSSRTARKVYWALVIGVPSIADGMIELPLAKQPGTGGEKM
HVDEAEGLPARTRYRVIERAGNRAAWVELQPYTGRTHQLRVHLAAIGHPIVGDGKYGGKD
SFLTGTISRKMHLHARRIRVDHPDGGRVDVMADLPAHFASSLADLGFDISLGDMPLDDEI
DRSPTREDEKKFARQHAKQIRKDRKGERRSRGGGG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccgtcctcccggcaagggcgacgcgccgcgcggtcgcaaacccgcaaccccc
ggcaaatccttcggcaagccgtccggcgcacccggtcgcgcccgtggcggcgcaaaggcg
gccaccgcgcgcaagggggagggtggcaagcccgcgtcgaaaccacccttcaagtccggc
ccgaaaaagcccgccgccaaacccgccgctgccaaggctgcgccagtggttcaggccgct
gcgcccaagccttcggccgcgaagggcgtctcgctcgacgtgcgccaatatcgggttcat
gcggacgatgacggcatccgcctcgaccgctggttccagcgccacttgcccgatgtcggc
ttcaacatcgtgtcgcgctggtcgcgcaccggccagttgcgggtcgacggcgcgcgcgcc
gcaccgggggatcgcatcgccgaagggcagatgatccgcgtcccgcccgccgaagcgaag
gccgccccgtccgaacgccccgcccggcgtgtcccggtcatagacctgacccctgacgaa
atcgcctatgcgcaggaaatggtcatccatcgcgatgcgcaggctatcgtcatcaacaag
ccgcccggactcgccacgcagggcgggaccaagacggacgagcatgtcgaccgcttgctc
gacggcctgatcttcaacgccgaatcgcggccaaagctggtccaccggctggacaaggac
acgtcgggcgcgctgctgctcgcccgctccagccgcgccgccgcccatttcgccaaggcg
ttttccagccgcaccgcgcgcaaggtctattgggcgctggtcatcggcgtgccgtccatc
gcggacggcatgatcgaactgccgctggccaagcaaccgggcaccggcggcgaaaaaatg
catgtcgacgaagcggaaggcttgcccgcccgcacccgctatcgcgtcatcgaacgcgcg
ggcaatcgcgccgcctgggtcgaactgcaaccctataccggccgcacccaccagttgcgc
gtccatctcgccgcgatcggccatcccatcgtcggcgacggcaaatatggcggcaaggac
agtttcctgaccggcacgatcagccgcaagatgcaccttcatgcccgccgcatccgtgtc
gatcatcccgatggtggccgcgtcgacgtgatggcggacctgcctgcccatttcgcctcc
agccttgccgatctcggcttcgacatcagcctgggcgacatgccgctggatgacgagatc
gaccgcagccccacgcgcgaggatgaaaagaaattcgcgcgccagcatgccaagcagata
cgcaaggatcgcaagggcgaacggcgctcgcggggcgggggcggatag
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