Sphingobium xenophagum: CJD35_17780
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Entry
CJD35_17780 CDS
T05146
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shyd
Sphingobium xenophagum
Pathway
shyd01501
beta-Lactam resistance
shyd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CJD35_17780
01503 Cationic antimicrobial peptide (CAMP) resistance
CJD35_17780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyd02000
]
CJD35_17780
01504 Antimicrobial resistance genes [BR:
shyd01504
]
CJD35_17780
Transporters [BR:
shyd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CJD35_17780
Antimicrobial resistance genes [BR:
shyd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CJD35_17780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Patched
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ASY46316
UniProt:
A0A249MYC2
LinkDB
All DBs
Position
II:650669..653818
Genome browser
AA seq
1049 aa
AA seq
DB search
MLSRFFIERPIFAWVIAIGVMIAGIGAMLSLPIAQYPDIAPPSVGVNATYPGASAETVET
SVTQVIEQQLTGIDGLMYFSSSSSSTGRSSITVTFVKGTNPDTAQVQVQNKVQQALSRLP
NAVQQQGLTVTKSQTDFLMLVGLYDETNRASQSDISDYLVNHFQDSIARIDGVGSSQIFG
SQYAMRIWLDPYKLAAVKLMPSDVQSAIAAQNVEVSAGQIGADPAPAGQQLNATVTARAR
LQTPEQFRNIIVKTQSDGSIVHLSDVARVELGNESYTTAAQLNGHPASGMALQLAPGADA
LKTAELVKARVATLSTNLPDGYRIVFPRDTTPFIKLSVEEVVKTLIEAVLLVVVVMFLFL
QSWRATLIPTIAVPVVLLGTFGVLALFGYSINTLTLFGMVLSIGLLVDDAIVVVENVERI
MEEEGLSAREATIKSMEEIGSALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSSML
LSVLVALILSPALCATILKPIAEERRTQGWSGKFNRWFDRLTDGYVRRTTRMLGKRTLFW
GGYVIILAILVLLFVRLPTSFLPVEDQGQVMVQMTLPAGAKSSRTARAVEQMQNYFLSDE
KDNISFAFVMTGFSFAGQGENTAQGFINLAPWGDRPGAINSANAIVGRANKQLAAIRDAR
VLAMTPPAIRGLGQSNGFTFELLNSGGLSRARFLELRDQLLAAAQKDPQLAGVRAATLED
TPQLKVDIDSEKLAVLGLTQSDVDNVLTSAWGSRYVNDFVDRGRVKRVYMQADAPYRALP
SDLDKWMVRSNATGEMVPFSAFATSHWTMGPTTVARFNGQSAYEIQGQAGPGASSGEAMD
RIVELQKQLPAGTSYAWSGLSYQEQLSGGQAPLLYALSVLIVFLCLAALYESWSIPFAVL
LVIPLGLIGAVVAVWARGLENNIYFQVGLLTTMGLAAKNAILIVEFAELAHRQGKDALSS
ALEAARLRFRPILMTSLAFIAGVVPLAVATGAGAQSRIAIGTAVVGGMVTATVLAIFYVP
LFFVTIARLFGNDRPTKPDPAPPAAGVPA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
ttgctcagtcgctttttcatcgaacggccgattttcgcctgggtcatagccatcggcgtg
atgatcgcgggcatcggggccatgctgtcgctgccgatcgcccaatatcccgacattgcg
ccgccgtcggtcggcgtcaacgcgacctatcccggcgcgtccgccgaaaccgttgaaacc
agcgttacccaggtcatagaacaacagctgaccggcatcgacgggctgatgtatttctcc
tcctcatcctcctcgaccgggcgttcgtcgatcacggtgacgttcgtgaagggcaccaac
ccggacacggcgcaggtgcaggtgcagaacaaggtgcagcaggcgctcagtcgcttgccc
aacgccgtgcagcagcagggattgacggtcaccaagtcgcagaccgacttcctgatgctg
gttggcctttatgatgagaccaaccgggcttcgcagtccgacatttccgattatctggtc
aatcatttccaggattcgatcgcgcggatcgacggcgtgggatcgtcccagatattcgga
tcgcaatatgcgatgcggatctggctcgacccctacaagctggccgccgtcaagctgatg
ccgtccgacgtgcagagcgcgatcgccgcgcagaatgtcgaagtgtccgccgggcagatc
ggcgctgatcccgcccctgccgggcaacagctcaacgcgacggtcacggcgcgggcgcgg
ctgcagacgcccgagcagttccgcaacatcatcgtcaagacgcagagcgacgggtccatc
gtccatttgtccgacgtcgcgcgggtggaactgggcaatgaaagctatactactgcggcc
caactgaacggtcatccagcgtcgggcatggcgttgcagctggcgccgggggccgatgcg
ctcaagaccgcggaactggtcaaggcgcgggtggcgacgctgtcgaccaacctgcccgac
ggctacaggatcgtattcccgcgcgacacgacgcccttcatcaaattgtcggtcgaggaa
gtcgtcaagacattgatcgaggcagtgctgctggtcgtcgtcgtgatgttcctgttcctg
caaagctggcgcgcgacgctgatcccgacaatcgcggttcctgtcgtgctgctcggcaca
ttcggcgtgctggcgctgtttggctattcgatcaacacgctgaccctgttcggcatggtg
ctgtcgatcgggttgctggtcgacgacgcgatcgtcgttgtcgaaaatgtcgagcgcatc
atggaggaggaaggcctttcggcgcgcgaggcgacgatcaagtcgatggaggagattggc
agcgcgctggtgggcattgcgctcgtcctgtcggccgtattgttgcccatggcctttttc
ggcggatcgacgggcgtaatctatcgccagttttcgatcacgatcgtgtcgtccatgctg
ctgtcggtgctggtggcgctgatcctgtccccggccttgtgcgccacgatcctgaaaccc
attgcagaggaacggcggacacagggctggtcgggcaagttcaatcgctggtttgataga
ctcaccgatggctatgttcgccgtacgacgcgcatgctgggcaagcggacgcttttctgg
ggtggttatgtgatcatcctggccatcctagtcctgctgttcgtgcggctcccaaccagt
tttctgccggtggaggatcaggggcaggtgatggtgcaaatgaccctgcccgccggtgcg
aaatccagtcggaccgctcgcgcggtggaacagatgcagaattatttcctcagtgacgag
aaggacaatatctccttcgccttcgtcatgaccggcttcagctttgcgggccagggcgaa
aataccgcgcagggcttcatcaatctggcgccgtggggcgatcggccgggcgccataaac
agcgccaatgcaattgtcgggcgggccaacaagcagcttgccgccatccgcgatgcgcgg
gtgctggcgatgacgccgcctgccattcgcggccttggccagtccaacggcttcaccttt
gaattgctcaatagcggcgggctgtcgcgcgcgcgctttctggagttgcgcgatcagttg
ctggccgctgcgcagaaagacccgcagcttgcaggcgtgcgcgccgccacgctggaagat
acgccacagctcaaggtcgatatcgattccgaaaaactggccgttctggggctgacccaa
agcgatgtcgacaatgtgctgacatccgcctggggcagccgctacgtcaatgatttcgtc
gatcgcggcagggtgaagcgcgtttatatgcaggccgatgcgccctatcgcgcgctgccg
agcgatctcgacaaatggatggtgcggtcgaacgcgaccggcgagatggttcccttctcc
gccttcgccaccagccactggacgatgggaccgaccaccgttgcgcgtttcaacggtcag
tccgcctatgaaattcagggacaggctggccccggcgcgagttcgggcgaagcgatggac
cggatcgtcgaattgcagaagcaactgcccgccggcaccagctatgcttggagcggcctg
tcctaccaagagcaattgtcgggcgggcaagcgccgttgctttatgcgctttccgtgctc
atcgtctttctgtgcctggccgcgctgtatgaaagctggtcgatcccctttgccgtactg
ctggtcattcccctgggtctgataggcgcagtggttgcggtgtgggcgcgcgggttggag
aataatatctattttcaggtcgggctgctgaccaccatggggctggcggcgaagaatgcg
atcctgatcgtcgaatttgccgaactggcgcatcggcagggcaaggacgccctgtcgtcg
gcgctggaggcggcgcggctgcggttccggccaattctgatgaccagtctggctttcatc
gcaggggtcgtcccgctcgccgtcgccaccggcgcgggcgcgcagagccgtatcgcgatc
ggcacggcagtggtgggcggcatggtgacggcgacggtgttggcgattttctacgtgccg
ctcttcttcgtcactatcgcccggctgtttggcaatgaccggccgaccaagcctgatccg
gccccgcccgctgccggagtgcccgcatga
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