Sphingobium xenophagum: CJD35_22145
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Entry
CJD35_22145 CDS
T05146
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00521
Streptomycin biosynthesis
shyd00523
Polyketide sugar unit biosynthesis
shyd00541
O-Antigen nucleotide sugar biosynthesis
shyd01100
Metabolic pathways
shyd01110
Biosynthesis of secondary metabolites
shyd01250
Biosynthesis of nucleotide sugars
Module
shyd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CJD35_22145 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CJD35_22145 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CJD35_22145 (rfbC)
Enzymes [BR:
shyd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CJD35_22145 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ASY47167
UniProt:
A0A249N174
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All DBs
Position
p5:19894..20457
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AA seq
187 aa
AA seq
DB search
MDIQTFDIAGVTLLTPRHIGDERGYFAEVFRADLFMQHVGDFGFVQDNESLSAKVGTIRG
LHFQSNPHAQGKLVRCTAGALFDVAVDIRAGSPTYGQWVGETLTPDNGKQLWVPSGFAHG
FCTLEPNTVIAYKVTDYYSAECDKGLAWDDPTIGITWPDVADASTLSPKDTRQPLLADLP
AYFSWSN
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggacatccagacttttgacatcgctggcgtcaccttgttgacgccccgccatatcggc
gacgaacgcggttattttgccgaagtgttccgtgccgacctgttcatgcaacatgtgggc
gacttcggctttgtgcaggataatgaatccctcagcgcgaaggtgggcacgatccgcggc
ttgcatttccagagcaatccccacgcgcagggcaagctggtgcgctgcaccgcaggcgcg
ctgttcgacgtggccgtcgacatccgtgccgggtcgcccacctatggccaatgggtcggg
gagacgctcacccctgacaatggcaagcagctctgggtaccgtcgggctttgcccatggc
ttctgcacgctggaaccgaacacggtcatcgcttacaaggtgaccgattattacagcgcc
gaatgcgacaagggtcttgcctgggatgatcccacgatcggcatcacctggcctgacgtc
gcggatgccagcaccctctcccctaaggatacgcggcagcccctgctcgccgacctccct
gcctatttcagctggagcaactaa
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