Candidatus Sulfidibacterium hydrothermale: LA303_04255
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Entry
LA303_04255 CDS
T07944
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00521
Streptomycin biosynthesis
shyr00523
Polyketide sugar unit biosynthesis
shyr00541
O-Antigen nucleotide sugar biosynthesis
shyr01100
Metabolic pathways
shyr01110
Biosynthesis of secondary metabolites
shyr01250
Biosynthesis of nucleotide sugars
Module
shyr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LA303_04255 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LA303_04255 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LA303_04255 (rfbC)
Enzymes [BR:
shyr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LA303_04255 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UBM63190
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All DBs
Position
complement(1084975..1085520)
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AA seq
181 aa
AA seq
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MEIVKTKIPDLYILKPKVFEDERGYFFESYNKETFLKLGIDQNFVQDNESKSMKGVLRGL
HFQKPPFTQGKLVRVMHGAVLDVAVDLRKKSPTYGQWASVILTHQNKWMYWVPPGFAHGF
ITLEDNTVFFYKCTNVYNKASEGSIRWNDPDLNIDWQLKEDPILSEKDKNAPFFREFDSP
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtaaaaacaaaaatacccgatctgtacattttaaaaccgaaagtatttgaa
gatgagcggggttatttttttgaatcctacaacaaagaaacttttcttaagctgggcatt
gaccagaattttgtacaggacaacgaatcgaaatccatgaaaggggttttgcgcgggctt
cattttcaaaaaccgccttttacccagggaaaacttgtacgggtgatgcacggtgcagta
ttggatgtggcagtcgatctccggaagaaatcgcccacttacgggcaatgggcttccgta
atccttacccatcaaaacaaatggatgtactgggttccgcctggctttgcccacggattt
attacactggaagacaatacagtattcttttacaaatgcaccaacgtgtacaacaaagct
tcggaaggaagtatccggtggaatgatccggatttgaatattgactggcaactgaaagaa
gatcccattttgtcggaaaaggataaaaatgctccttttttccgggaatttgacagcccc
ttttga
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