Candidatus Sulfidibacterium hydrothermale: LA303_13185
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Entry
LA303_13185 CDS
T07944
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr00250
Alanine, aspartate and glutamate metabolism
shyr00410
beta-Alanine metabolism
shyr00430
Taurine and hypotaurine metabolism
shyr00650
Butanoate metabolism
shyr01100
Metabolic pathways
shyr01110
Biosynthesis of secondary metabolites
shyr01120
Microbial metabolism in diverse environments
shyr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LA303_13185
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LA303_13185
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LA303_13185
00430 Taurine and hypotaurine metabolism
LA303_13185
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA303_13185
Enzymes [BR:
shyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
LA303_13185
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UBM62334
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All DBs
Position
complement(3208772..3210163)
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AA seq
463 aa
AA seq
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MISKKRKNGGKEIVSTTYANRFFTKPVPRFQIPEKGMDADVVYQLIHDELNIDGNPALNL
ASFVTTWMEPQAEKLIMETLNKNLVDQDEYPQTGKIQARVVNMLARLFHAPESKEYIGTS
TIGSSESIMLGLLAHKWSWRKRREKEGKSTRNPNMVIGADVHVVWEKFARYFDVEMRIIP
MKENRFTITAEEVKERIDENTIAVGAVMGTTFTGELDPIQEINSMLEEVEKEKGWHIPIH
VDGASGGFILPFLYPDFKWDFRLSHVHSINVSGHKYGLVYPGVGWLIMRDKVDLPEELIF
YVNYLGSQEATYTLNFSRGSAMMIAQYYNLLRLGKTGYRLVMENSLKNARYLASKLRKVR
NLEVINKEIQLPILALKVKNRKEFNVFQLSDKLRERGWIVPAYTLPPDAQKVEVLRIVIK
ENFSRDMADMLIDDMHRFTKELIEQCKPPRPKIKTNQHHKHIC
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatatctaaaaaaagaaaaaacggcggaaaagaaattgtttcaaccacttatgctaac
cggttttttaccaaaccggttccccggtttcagattcctgaaaaggggatggacgccgat
gtcgtttatcaacttatccatgatgagctgaacattgatgggaatccggcattgaatctg
gcttcttttgttaccacatggatggaaccccaggcggaaaagctgatcatggaaacgtta
aacaaaaacctggttgatcaggatgaatatccgcagaccggtaaaattcaggcgcgtgtg
gttaacatgctggcacggctttttcatgctccggaaagtaaagagtatatcggaacctcc
acgattggttcatcggaatctattatgctgggattgttggcacacaagtggagttggcgc
aaacggcgtgaaaaagaaggaaagtcaacacgcaatcctaatatggtcattggtgcggat
gtgcatgtagtttgggagaaatttgcccgctattttgatgtggaaatgcggataattccg
atgaaagaaaaccgttttaccattacggcagaagaagtaaaagaacggattgatgaaaat
acaattgcagtgggagctgtcatgggaaccacttttaccggtgaacttgatcctattcaa
gagattaacagcatgcttgaagaagttgaaaaagaaaaaggctggcatattcctattcat
gtagacggtgccagtggcgggtttatccttccatttctttacccggattttaaatgggat
tttcgtctttcgcatgtacattccattaatgtttccggtcacaaatacgggttggtttat
cccggcgtaggttggcttatcatgcgtgacaaggtcgatcttccggaggagttgattttt
tatgtgaattatcttggtagtcaggaagcaacgtatacactcaacttttcgcgtggcagc
gccatgatgattgcccagtattataacctgctgcgactgggaaaaacaggttatcgcctg
gtgatggaaaacagcctgaaaaatgcccggtatctggcttctaaattaagaaaagtcagg
aacctggaagtaataaacaaggagattcagttgcctattttagctttaaaggtgaaaaac
cgtaaggaatttaatgtttttcaattgtcagataaattgcgtgagcggggatggattgtc
ccggcttataccttgcctcccgatgcccaaaaagtggaagttttacgcattgttatcaaa
gaaaattttagtcgcgatatggccgatatgctgattgatgacatgcatcgttttaccaaa
gaattgatagaacaatgtaaacctccccgtccaaaaattaaaacaaatcagcatcataag
catatttgttaa
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