Shinella sp. HZN7: shn_19520
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Entry
shn_19520 CDS
T04278
Name
(GenBank) LuxR family transcriptional regulator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
shz
Shinella sp. HZN7
Pathway
shz02020
Two-component system
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
shn_19520
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_19520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_19520
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
shn_19520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Sigma70_r4_2
HTH_31
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ANH06011
UniProt:
A0A1A9G6I9
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Position
complement(4052389..4053129)
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AA seq
246 aa
AA seq
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MKINLLVQFLALIDELRGREETTAEFERLIKLYGFDYYGLLQAPKPAEDPPSLLLAGHWP
KGWLETYLRKRYMQVDPTMRYLGHAQAGFRWRDTLGAFRLSPHRKRMERMMVDARQNGLE
DGYVFPVHGRRGLLGSLSLGGKPIDLESVEVGLFDGIARRLYWKLIHAADPEAAARLSAI
VDVELTRREMEALSLLAEGMTSHDIGRVLGISSHTVDWYMNGIQEKLGARNRHHAIAIAF
RLGLVS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaacttgctggtgcagtttcttgcactgatcgacgagttgcgcggccgggag
gaaaccacggccgagttcgagcgtcttatcaagttgtacgggttcgattactacggcctc
ctccaggcgccgaagccggcggaagacccgccgagcctgctgcttgccggccattggccc
aagggctggctcgaaacctatctgcgcaagcgctacatgcaggtcgatccgacgatgcgc
tatctcggccatgcgcaggcgggcttccgctggcgcgacacgctcggcgccttccgcctc
agcccgcaccgcaagcgcatggagcgcatgatggtggacgcgcggcagaacggactggag
gacggttacgtgttccccgtccatggccgtcggggacttctcggcagcctcagcctcggc
ggcaagccgatcgacctggaaagcgtggaagtcggcctgttcgacggaatcgcgcggcgg
ctctactggaagctcatccatgccgccgatccggaggccgccgcccgcctttccgccatc
gtggacgtggaattgacacgccgcgagatggaggcgctcagcctcctggccgaaggcatg
acctcccatgacatcggccgggttctcggcatttccagccatacggtggactggtacatg
aacggcatccaggaaaagctcggcgcgcgcaaccggcaccacgccatcgccatcgccttc
cggctggggctcgtctcctga
DBGET
integrated database retrieval system
