Shinella sp. HZN7: shn_21850
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Entry
shn_21850 CDS
T04278
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shz03036
]
shn_21850
Chromosome and associated proteins [BR:
shz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
shn_21850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
ANH06903
UniProt:
A0A1A9G992
LinkDB
All DBs
Position
4557389..4561699
Genome browser
AA seq
1436 aa
AA seq
DB search
MSPVAGPATPVARASAIIAAAHQLLTLLERGQRIDNANLRIAMETAFEASDTSGAWGWKT
AYEACEGATVLFLRKYGRALFRKAGTPAARLAALSKITGLLPTHTRRSEEAQALQQFSTP
VPLGLAAIAAAAIAPHDIVLEPSAGTGLLAILAEISGGSLLLNELAETRADLLGQLFPAL
AVTRCDAAQIDDHLPACAVPSVIVMNPPFSVMANVSGRVSDAAARHVASALARLADGGRL
VTITGANFGPEQPAWRDTFVRLQERGRVIFTAAIHGSVYAKHGTSIETRLTVIDKLPAED
PAAFPGSSGVALDVATLLAWIEAQIPPRLPVTLPDIAPPVSGSAPRTVRGYLARTATEHP
AARSTMDPQGVELAYDTMDWTPPEGAHLTDAIYEEYGLQSIRIASSQAHPTKLVQSAAMA
SVAPPKPTYRPMLPANITDLLSDAQLETVIYAGEAHSDFLTGSWTVDATCDLVQAAKPDA
ENAVRFRRGFMLGDGTGAGKGRQSAGIILDNWLRGRRKAVWISKSDKLIEDAQRDWSALG
MERLLVTPLSRFPQGRPITLSEGVLFATYATLRSDDRGEKVSRVRQIVEWLGSDFDGVII
FDESHAMANAAGGKGERGDVAASQQGRAGLRLQHALANARVVYVSATGATTVHNLAYAQR
LGLWGGEDFPFATRAEFVEAIEDGGVAAMEVLARDLRALGLYTARSLSYDGVEYELIEHT
LTDEQRRIYDAYASAFAVIHNHLDAAMQAANITGSPDSGGATLNRQAKSAARSAFESAKQ
RFFGHLLTSMKTPTLIRSIERDLDDGHAAVVQIVSTGEALMERRLAEVPTEEWNDIRVDI
TPREYVLDYLAHSFPVQLYEPFTDGEGNLSSRPVYRDGHPVESREAVARRDELIERLASL
PPVPGALDQIVQRFGTDMVSEVTGRSRRIVRKGERFAVENRAPSANLAETAAFMDDLKRI
LVFSDAGGTGRSYHAELSAKNQRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPI
ATNVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESSYARDALRQLYLLIV
RGKVEGCSLGRFESATGLKLTDDNGIKDELPPITTFLNRLLALTIELQGILFTAFEQLLD
AKVAGAIASGVYDVGLETLTAESFVVAERTTIYTHPATGAQTRLLTITERRRNQPTTLDT
ALGWLDDPHARLLINARSGRAAVQVPAPSIMLDDGEIERRVRLIRPMEQHHASLAMMEDS
HWREAARDSFAAVWQREVAEVPAYTDGAIHMVSGLLLPVWKRLPNESTRVYRLQTDDGER
IIGRRVSPAWAMNAASTGTANLSSDDAYAALVDGRIILDLASGLQLRRARVMGANRIELS
GFTDTMRDRLRAYGLFSEIISWKLRVFVPVDASGPAIIGKLLATYPVERISEREAA
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgtagccggtccggctacgcccgttgcccgcgcgtccgccatcatcgccgcc
gcccatcagcttctcaccctgctcgaacgcggccagcggatcgacaacgccaatctccgc
atcgccatggaaacggccttcgaggcttccgacacgagcggcgcctggggctggaagacg
gcctacgaagcctgtgaaggcgcgaccgtcctgttcctgcgcaaatacggacgtgcgctt
ttccgtaaagccggcactccggctgcacggcttgccgccctgtcgaaaatcaccggcctt
ctgccgacgcacacccgtcgctccgaggaagcccaggcgcttcagcaattctcgacgccg
gtcccgctcggcctcgccgctatcgcggccgccgcgatcgcaccgcacgacattgtgctg
gagccgtcggcaggcacgggtcttctcgccatcctcgccgagatcagcggcggctcgctg
ctcctcaacgaactggcggaaacccgcgccgatctacttggccagctctttccagccctt
gccgtcacgcgatgcgacgccgcccagatcgacgaccaccttccggcgtgcgccgtccct
tccgtcatcgtgatgaatccgcccttctcggtgatggcgaacgtctccggccgggtctcc
gacgccgctgcgcgtcatgttgcttcggccctggcgcggcttgccgatggcgggcgtctg
gtgacgatcaccggcgccaacttcggccccgagcaaccggcctggcgcgacaccttcgtt
cggcttcaggagcgtggccgcgtcatcttcaccgcggcgatccacggctctgtctatgcc
aagcatggcacgagcatcgaaacacggctcaccgtcatcgacaagctgccggccgaagac
ccggccgcgttccctgggtcctctggcgttgcgctcgacgtcgctacgctgctcgcatgg
atcgaagcgcagattccaccgcgcctgccggtcacgctgcccgacatcgcgccgcccgtg
tcgggctcggcgccccgaaccgtgcggggttatctcgcgcgcaccgccacggagcatccg
gccgcacgctccaccatggacccgcagggcgttgaactggcctacgacacgatggactgg
acgccgccggaaggcgcccacctcacggatgcgatctatgaagaatatggattgcagtcg
atccgtattgccagttctcaggcgcaccccaccaagctcgtgcagtcggcggccatggcg
agcgttgcaccgcccaagcccacctatcggccgatgctgcccgcgaacatcaccgatctc
ctgtcggacgcccagctcgaaaccgtcatctatgccggcgaagcccattcggacttcctc
accggctcctggaccgtcgatgcgacctgcgatctcgtgcaggcggccaagcccgatgcc
gaaaacgccgtgcgcttccggcgcggcttcatgctcggcgacggcaccggggccggcaaa
ggtcgtcaatctgccggcatcatcctcgacaactggctgcgcggtcgccgcaaggcagtc
tggatctccaaatctgacaagctgatcgaggacgcgcagcgcgattggtccgcgctcggc
atggagcgcctgctggtcacgccgctgtcgcgcttcccgcaagggcgaccgatcacgctg
tcggaaggcgtcctgtttgcaacctatgccacgctacggtccgacgaccgtggtgagaag
gtttcccgcgtccggcagatcgtcgaatggttgggctccgatttcgatggagtgatcatt
ttcgacgagagccacgccatggccaatgccgcaggcggcaagggagaacgcggcgacgtt
gccgcctcgcagcagggacgtgcgggccttcggctccagcatgccctggccaacgcgcgc
gtcgtctatgtctccgccaccggcgcgaccactgttcacaatctcgcctatgcccagcgg
ctcgggctgtggggcggtgaggatttccccttcgccacccgcgccgaatttgtcgaggcg
atcgaggacggcggtgtcgcggccatggaagtgctcgcccgcgatctgcgtgcgctgggc
ctctataccgcccgctcgctctcctacgatggcgtcgaatatgagctgatcgaacacacc
ctgaccgacgagcagcggcgcatttacgatgcctacgccagcgccttcgccgtcatccac
aatcatctcgacgccgcgatgcaggcggccaacatcaccggcagcccagacagcggggga
gccacactgaaccgccaggccaagtccgccgcccgctcggccttcgagtccgccaagcag
cgtttcttcggccatctgctcacgtcgatgaaaacgcccacgctgatccgatccatcgaa
cgcgacctggatgatggccacgccgctgttgtccagatcgtctcgaccggcgaagcgctg
atggagcgccggctggcagaagtcccgacagaggaatggaacgatattcgcgtcgacatc
acgccgcgcgaatatgttctggactatctggcccattccttcccggtccagctctacgag
ccgttcacggatggcgagggcaatctgtcctcgcgtccggtctatcgtgacggccacccc
gtcgagagccgcgaagctgtcgcgcgccgtgacgagctgatcgaacgtcttgcgtctttg
ccacccgttccgggggcgctcgaccagatcgtacagcgcttcggcacagatatggtctcc
gaggtgacgggccgctcccggcgcatcgtccgcaaaggcgaacgcttcgccgtcgaaaac
cgcgcaccatccgccaaccttgccgagacggctgcgttcatggacgacctgaagcgcatt
ctcgtgttcagcgacgccggcgggaccggccgcagctatcacgccgaactgtcagcaaag
aaccagcgtctgcgcgtgcattatctgctcgaacccggatggaaggccgacgccgccatc
cagggtctgggccgcaccaatcgcaccaaccaggcgcaaccgccgctgttccgcccgatc
gccacgaacgtcaaagccgagaaacgcttcctgtccacgatcgcacgtcggctcgatacg
ctgggtgcgatcacgcgcggtcagcgccagaccggaggccagggtctgttccggcccgag
gacaatctggaatcgagctacgcccgcgatgcgctgcggcagctctatctcctgatcgtt
cgcggcaaggtcgagggttgctcgctgggtcgcttcgagtccgcgaccggcctgaaattg
accgatgacaacggcatcaaggacgagttgccgccgatcaccacgttcctcaaccgcctg
ctggcgctgaccatcgagcttcagggcatcctcttcaccgccttcgagcaattgctcgac
gccaaggtggccggagccatcgccagcggcgtttatgatgtcgggctggaaacgctgacg
gcggagagtttcgtcgtcgctgagcgcacgaccatctacacccatccggcaacgggcgca
cagacgcggctgctcaccatcaccgagcgccgccgaaaccaaccgaccacgctcgatacg
gcgctcggctggctcgacgatccgcatgcccggctgctcatcaacgcgcggtcgggacgc
gctgctgtccaggtgccggcgccgtccatcatgctcgatgacggcgagatcgagcgccgt
gtccgcctgatccggccgatggaacagcaccacgcaagcctcgccatgatggaagacagc
cattggcgggaagccgctcgcgacagctttgcagcggtctggcaacgtgaagtcgccgaa
gtgccggcctataccgatggcgccatccacatggtcagtggtttgctcctgccggtgtgg
aaacgcctgccgaacgagtcgacgcgcgtctatcggctccagaccgatgatggcgaacgc
atcatcgggcggcgggtttcgcccgcctgggccatgaatgccgcctcgacgggaacggcc
aacctcagcagcgatgatgcctacgccgctctggtggatggtcgcatcatcctcgacctg
gccagcgggctccagcttcgccgcgcccgcgtcatgggcgcgaaccggatcgaactgtcc
ggcttcaccgacaccatgcgggatcgcctgcgcgcctatggcctcttcagcgagatcatc
tcgtggaagctgcgcgtcttcgttccggtcgatgcctctggtcccgccatcatcggcaag
ctgctcgccacctatccggtcgagcggatcagcgagcgtgaggcagcgtga
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