Shinella sp. HZN7: shn_30435
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Entry
shn_30435 CDS
T04278
Name
(GenBank) diguanylate cyclase
Organism
shz
Shinella sp. HZN7
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
5TM-5TMR_LYT
PAS_7
PAS_9
PAS
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ANH08465
UniProt:
A0A1A9GBK1
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Position
pShin-05:complement(64746..66647)
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AA seq
633 aa
AA seq
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MDDVWKVLAGNLAAVALIVSIWTHLSYRFYQLPPKLRCAGLGVTMGLAAIASMLLSVRFG
VGVIFDLRLAIIESAAVFGGPGAALITAIMAAGFRFYLGGAGVAPGLTAIAIVFVLGSSL
WFFGGRKPLSHAPSILSAAVLAGCLSIAVLALLPQADFQRAAAQVGLPIVVLNFTTTAAI
GFFLAYFRRFTLERDILHAALTQAPDYHYVKDLNHRFVVANLNVARHNGRSRSSEMVGLT
DYDLAPRTRAEQLIAAEAGILQTGQPLNHFEEFLVEEGKPPRWYSTSKVPLRNRQGDMVG
LAGVTVDITEKKLLEQELRSSRNIMAQAMAEMSDGLAMFGPDGRVVFCNDHYRALFPRSA
YARKEGAHITEIVRASVRNGERQDMPIDLDEDSIQAAGQTLFINKDEVIPLADGRWLSLR
TRVTEDQHVLALVSDITAMKESELSLKNFAERMKGLAETDALTSLANRRSFDDGLLREFE
AARQTDRPLSVLLVDVDRFKAYNDRYGHLEGDSCLKSVAGAIAAAVRRSGDIAARFGGEE
FAIVLPDTDGDTAITIAEKVRSSIRDLGLVHEGSEYGIVTASLGATVFTSDSRVSNPAEL
VARADLALYQAKDAGRDRVGFQRLAEERVKKPA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtctggaaagttcttgctggcaatctcgctgcagtggcattgatcgtctcg
atctggacacatctttcctatcgcttctaccaattgcctcccaagctgcgctgcgccggc
ctcggggtcacgatgggcctcgcagcgatagcctcaatgctactctcggtgcgcttcgga
gtcggggtcatattcgaccttcggcttgcgattatcgaatcggccgcggtattcggtgga
cctggagctgcactgatcacagccataatggcagcgggtttccgcttctaccttggtggg
gcaggggtagcgcctgggctgaccgcgatcgccattgttttcgttctaggaagctcgctc
tggttcttcggcggccgcaagccgctgagccatgcgccgtcgatcctgagtgccgctgtg
cttgcaggctgtctttcgattgcggtccttgcgttgcttcctcaggcggacttccagagg
gcggcagcacaagtcggtctgccaatcgtcgtcctgaattttacgacgaccgctgctatt
ggcttttttctggcgtatttccgtcggttcacgctcgagcgcgacattctgcatgcggcg
cttacgcaggctcctgattaccattacgtcaaagacctcaaccaccgtttcgtcgtcgcg
aaccttaatgttgctcgccacaatgggcgatcgcggtcttccgagatggtcgggctgacg
gactatgacctcgcgccgagaacgagagccgagcagttgatcgcagcagaggccggtatc
ctgcaaaccggccagccgctgaaccatttcgaggagttcctcgtcgaagaaggtaagccg
ccccgatggtactcgacctcgaaagtccccttgagaaaccgacaaggcgacatggtcggt
ctggccggcgtcacagtcgacatcactgagaaaaagttgctcgagcaggaactgcgatcc
agcagaaacatcatggctcaagccatggccgaaatgtccgatgggctcgcgatgttcgga
ccggatgggagagtggtgttctgcaacgatcactaccgcgcactgttcccgagatcagct
tacgcccgcaaggaaggtgcacacatcaccgaaatcgtcagagcaagcgtgcgcaatggt
gagcgccaggatatgcccatcgatctcgacgaagatagcatccaagctgctggccaaacg
ctcttcatcaataaggacgaagtcatcccactcgcagatggtcgctggttgtccttgaga
acgcgggtgactgaggaccaacacgtgctggcacttgtgtccgacatcactgcgatgaag
gagtctgagctttcgctcaagaactttgcggagcggatgaaaggcctggccgaaacagac
gcgttgacaagccttgcaaatcggcggtccttcgatgacggcctgctacgtgaattcgag
gcagccaggcagaccgaccgacctttgtctgtgcttctggtcgatgtcgacaggttcaag
gcgtataacgaccgttacggtcatcttgaaggtgacagctgcctcaaatcagtcgcgggg
gccatcgcggctgcagtccggcgctctggcgacatcgcagctcggttcggtggcgaggag
tttgcaatcgtgttacccgataccgacggcgacacggcgatcacgattgctgagaaggtc
agatcgtccatccgggacctcggcttggtgcacgaaggcagcgagtatggcatcgtgacc
gccagccttggtgctaccgtctttacgtcggattcgagggtgagtaaccccgccgaactc
gtagcacgggctgatcttgcactctatcaggcgaaggatgccgggcgagaccgcgtcggg
tttcagaggctagctgaagagcgcgtgaagaagccggcttaa
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