Shinella sp. HZN7: shn_31095
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Entry
shn_31095 CDS
T04278
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
shz
Shinella sp. HZN7
Pathway
shz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
shn_31095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shz03400
]
shn_31095
Enzymes [BR:
shz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
shn_31095
DNA repair and recombination proteins [BR:
shz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
shn_31095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
TetR_C_31
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
ANH08592
UniProt:
A0A1A9GBZ6
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All DBs
Position
pShin-06:34309..35091
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AA seq
260 aa
AA seq
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MKIATYNVNGINGRLPILLRWLKEDAPDIVCLQELKSPDERFPRRELQRMGYGAVWHGQK
SWNGVAILARDATPVLTRRGLPGDPDDTHSRYIEAAVDGILIGCLYLPNGNPAPGPKFDY
KLRWFERLQTYAADLLALDLPVALIGDFNVMPTDLDVYAPERWRDDALFRPEVRKAYADL
VAQGWTDAIRHLHPKERIYTFWKYWRNSFERDAGLRIDHLLLSPALAPWLRKASVRRSPR
GWDHTSDHAPVMIEIETPSD
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattgccacctacaacgtcaacggcatcaacggccggcttcccatccttctgcga
tggctgaaagaagacgcgcccgacatcgtctgtctgcaggaactcaaatccccggacgag
cgctttccccggcgcgagcttcagcgaatgggatacggggccgtctggcacgggcagaaa
agttggaacggcgtggcgatcctcgccagggatgcgacccccgtcctgacgcgccgcggc
ctgccgggcgatccggacgacacccatagccgttatattgaggccgccgtcgacggcatc
ctgatcggctgtctgtacctgccgaacggcaatccggcgcccggtcccaaattcgactac
aagctgcgctggttcgagcggcttcagacctacgcggccgaccttctggcgctcgatctt
cccgtggcgctgatcggtgatttcaacgtcatgccgacggatctcgacgtctatgcgccg
gagcgctggcgcgacgacgcgctgttccgcccggaggtccggaaagcctatgccgatctc
gtcgcccaaggctggaccgacgccatccgccatctccatccaaaggaacggatctacacc
ttctggaaatactggcgaaactccttcgaacgcgatgcgggcctgcgcatcgaccatctt
ctcctaagcccggcgctggcgccctggttgaggaaggcgagcgtccgccgcagtccgcgc
ggctgggaccacaccagcgaccacgcgccggttatgatcgagatcgaaacgccatcagat
tga
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