Shinella sp. HZN7: shn_34260
Help
Entry
shn_34260 CDS
T04278
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00521
Streptomycin biosynthesis
shz00523
Polyketide sugar unit biosynthesis
shz00541
O-Antigen nucleotide sugar biosynthesis
shz01100
Metabolic pathways
shz01110
Biosynthesis of secondary metabolites
shz01250
Biosynthesis of nucleotide sugars
Module
shz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
shn_34260
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
shn_34260
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
shn_34260
Enzymes [BR:
shz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
shn_34260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ANH09182
UniProt:
A0A1A9GDQ5
LinkDB
All DBs
Position
pShin-11:51335..51889
Genome browser
AA seq
184 aa
AA seq
DB search
MSDIRPTGLEGVLEIVPACFGDARGFFSETYNAARLAEAGVDLVFVQDNHSLSGRRGVLR
GLHYQLPPRAQDKLVRVVRGAIFDVAVDIRRGSPTFSRWVGVELSAEKWNQLLVPKGFAH
GFVTLAENTEVVYKVTDYYSPEHDRSIRYDDPDIAIDWPIASVDLQLSEKDLAARHLAEA
DVFP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatccgcccaaccggcctcgaaggcgttctcgagatcgtgcccgcctgtttc
ggtgatgcgcgcggtttcttctccgaaacctataatgcggcgcgtcttgctgaagccggt
gtcgatctcgtcttcgttcaggacaatcattccctttccggccggcgcggcgtgctgcgc
gggctgcactaccagcttcccccccgcgcgcaggacaagcttgttcgcgtggtgcgcggc
gccattttcgacgtggcggtcgatatccgtcgcggatcgccgacattctcccgttgggtc
ggcgtcgagctgtcggccgaaaaatggaaccagcttctcgtccccaagggttttgcccac
ggtttcgtcacgctcgccgagaataccgaggtcgtctacaaggtgacggactactattcc
ccggagcatgaccggtcgatccgctatgacgatccggatatcgccatcgactggccgatc
gcatccgtggacctccagctatcggaaaaggaccttgcggcccgccatctggccgaggcg
gatgtcttcccctga
DBGET
integrated database retrieval system