KEGG   Streptococcus intermedius JTH08: SCIM_0392
Entry
SCIM_0392         CDS       T02156                                 
Symbol
comFA
Name
(GenBank) superfamily II ATP-dependent DNA/RNA helicase
  KO
K02240  competence protein ComFA
Organism
sie  Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:sie00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sie02044]
    SCIM_0392 (comFA)
Secretion system [BR:sie02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   SCIM_0392 (comFA)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 AAA_19 AAA_22 UvrD-helicase DUF1647 Bac_DnaA Viral_helicase1
Other DBs
NCBI-ProteinID: BAM23046
LinkDB
Position
449691..450992
AA seq 433 aa
MIELQDYLGRIFTRSQLPLGLQQQAQTLSGMIEKKGKLWCNRCGQVVNKEKQQLPIGAYY
CRSCVRLGRVRSDEKLYYFPQAEFPKTNVLTWEGRLTDYQAKVSQGLVEAVAKQKNSLVH
AVTGAGKTEMIYQVVAQVINEGGAVCLASPRIDVCLELHRRLQEDFSCDIALLHGESEVY
FRSPLVIATTHQLLKFYRAFDLLIVDEVDAFPYVDNPMLYHAVTQSVKEQSTIIFLTATS
TDELDKKVSKGELNRLSLPRRFHGNPLIVPKKVWLENFQKYLNQKKLVPKLEQFVKKQRK
TGFPLLIFASEIKRGQELAEVLQSYFSSENVGFVASTTENRLDIVEKFRQKEITILVTTT
ILERGVTFPCVDVFVVEANHRLFSRSALVQIAGRVGRSMDRPTGELLFFHDGTNFAIERA
IQEIKAMNQEAGL
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgatagaattacaagactatttaggtcgtatctttacaagaagccaattaccattagga
ttgcagcaacaagctcaaacattgtcgggaatgatagaaaaaaaggggaaattatggtgc
aatcgttgtggacaagtagttaataaagaaaaacagcaactaccaataggtgcttattat
tgcaggtcatgtgtgcgattaggaagggtcagaagtgatgaaaaactctactattttcca
caagcagagttcccaaaaacgaatgttttgacatgggaaggaaggttaacagattaccaa
gctaaggtttctcaaggtcttgtagaggcagttgccaaacaaaaaaatagcctggttcat
gctgtcacgggagccggaaagacggaaatgatttatcaagtggtggcacaagttatcaat
gaaggtggtgcagtttgcttggctagccctcgaattgatgtctgtctagaactacatcgc
agattgcaagaagattttagttgtgatattgcactcctgcacggtgaatcagaagtttat
tttcgcagtcctcttgtgattgccacaacgcatcagcttctcaaattttaccgagcattt
gatcttcttattgttgacgaggtggacgcctttccttatgtggataatccgatgctttac
catgccgttacacaatcagtaaaagagcaaagtactataatatttctaacggcaacctct
acagatgagctggataaaaaagttagcaagggagagttgaaccgcttaagtctccctaga
cgttttcatggtaaccctttaattgttcctaaaaaagtttggttggaaaattttcaaaaa
tacctgaatcaaaaaaagctagttcctaagttggaacaatttgttaaaaagcaaagaaaa
acaggttttcctcttctcatttttgcttctgagattaaaagaggacaagaattggcagag
gttctccaaagttatttttccagtgagaacgttggctttgtagcctcaacgactgaaaat
cgactcgatattgtagagaaatttcgacaaaaagagattacaattttagtaacaacgaca
attctagaacgtggtgtgacttttccttgtgtagatgtttttgtggtggaggctaaccac
cgtttgtttagtcgcagtgctctggtacaaatagctggacgcgttggtcgcagtatggat
cgtccgacaggtgagctgctcttttttcatgatgggaccaattttgctattgaacgagct
attcaggaaattaaggcgatgaatcaggaggctggtttatga

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