Streptococcus intermedius JTH08: SCIM_1310
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Entry
SCIM_1310 CDS
T02156
Name
(GenBank) ABC multidrug transporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIM_1310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sie02000
]
SCIM_1310
Transporters [BR:
sie02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIM_1310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
MMR_HSR1
Zeta_toxin
KAP_NTPase
AAA_30
AAA_24
AAA_23
NTPase_1
AAA_16
AAA_18
RsgA_GTPase
TsaE
DO-GTPase2
T2SSE
AAA
Rad17
DEAD
SRP54
DUF87
AAA_33
AAA_14
AAA_29
nSTAND3
ResIII
AAA_28
Roc
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
BAM23964
LinkDB
All DBs
Position
complement(1490924..1492720)
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AA seq
598 aa
AA seq
DB search
MLTHNYQRRNWKMENKKSSLFSQVKPYIKGFQFPLLVAFVGVILSSVITVYGPVKLKEIT
NLITEGMRSRIDLKAISNIALFLAVLYVVGAVLNYMQSFIISSVVQHFSKRLRTAIAEKI
NKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMMFYNNVVLS
FVTIGSVLIGFVFVALIMGKSQRFFRAQQENLASVNGYVEEMYSGHNVIVSYNATEESKK
AFQMLNTKLYNSMWKSQFISGIMMPLMIFTGNFGYVMVVLVGASMALNGDVTMGTIVAFM
VYVRTFSQPLSQIAQGITTLQQASAAMGRVFEFLAELEMENDEHKSQQLATLKGDVTFDN
VFFGYNPDRTIIHDFSAKAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIEKGRITIDGVDT
KQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAATKAVGVHHFIKTLPK
GYDTVLDDTVSLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEG
RTSFVIAHRLSTIRNADLILVMRDGNIIEQGNHNQLMEENGFYADLYNSQFDEEAEYA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgcttactcacaattatcaaaggaggaattggaaaatggaaaataaaaaatcatcttta
tttagccaagtgaaaccctatatcaaaggattccagtttcccttgctcgttgcgtttgtg
ggagtaatactatctagtgttatcacggtttatggtccggtcaaattaaaagaaattacc
aatctcatcacagaaggaatgagaagtcggattgatctaaaggctatctctaatattgct
cttttcttagcagttttatatgtggtgggtgctgtattaaattatatgcaatcctttatt
atttcgtccgtcgttcagcatttttcaaaacgtttacggacagccattgcggagaaaatt
aataaattacccttgcggtattttgatagtcattcgcaaggggacactctttcacgagtc
actaatgacgtggatactgttggacaatctctgaaccaaagtttaggaacagtgatttca
tcaagtttgcttctcattgctgttctctttatgatgttttataacaacgtggttctatcc
tttgtaacgattggatcggttttgattggttttgtctttgttgcgttgattatgggcaaa
tcacaacggtttttccgtgcacaacaagagaatcttgctagtgtcaatggatatgtggaa
gagatgtattctggtcacaatgtcattgtcagctacaatgctactgaggaatcaaaaaaa
gcctttcaaatgcttaatacgaagctttataacagtatgtggaagtcccaatttatttct
gggattatgatgccgttaatgatatttacagggaacttcggttatgttatggtcgtattg
gttggagcgagcatggcattgaatggtgatgtcacgatggggacgattgttgcctttatg
gtatatgtacggactttttctcaaccattgtcccaaattgcacaagggattaccactctt
caacaagctagtgctgctatggggcgtgtatttgagtttttagcagagctggaaatggaa
aacgatgagcacaagtctcaacagctcgcaactttaaagggtgatgttacctttgataat
gtattctttggctacaatccggatcgaacaattattcatgatttttctgccaaggcaaaa
gccggccaaaagattgctattgttggtccgaccggtgctgggaaaacgacgattgtcaat
ctgttgatgaaattttatgaaattgaaaaagggcggattactattgatggtgttgatacc
aagcagatgaaacgttctgaagtgcatgatgctttctcaatggtccttcaagacacttgg
ttatttgagggaacgattaaagaaaatttgatttacaatcagaagaatatttctgatgaa
gcggttgtggcagcgactaaagctgtcggggttcatcactttatcaagactttgccaaaa
ggatacgatacagtgttggatgacacagtcagtctttctgttgggcaaaagcaattgcta
actatcgcgcgtgcacttcttaaggatgctcccttacttatcttggatgaagcgacttca
tctgttgatacgcggacagaagaattgatccaaaaagcgatggataagttgatggaggga
aggacttctttcgtcattgctcaccgcttgtcgaccattcgtaatgctgatttgattttg
gtcatgcgtgatggtaatatcattgaacaaggaaatcacaatcaattgatggaagaaaat
ggcttctatgctgatctttacaatagtcaattcgatgaagaggcagagtatgcgtaa
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integrated database retrieval system
