Streptococcus infantarius subsp. infantarius: Sinf_1216
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Entry
Sinf_1216 CDS
T01765
Symbol
uvrB
Name
(GenBank) excinuclease ABC (subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
sif
Streptococcus infantarius subsp. infantarius
Pathway
sif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sinf_1216 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sif03400
]
Sinf_1216 (uvrB)
DNA repair and recombination proteins [BR:
sif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sinf_1216 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sinf_1216 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
AAA_5
AAA_7
UB2H
AAA_22
AAA_16
AAA_25
AAA_19
AAA
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEZ62531
LinkDB
All DBs
Position
complement(1239848..1241839)
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AA seq
663 aa
AA seq
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MIDRIENNHFKLVSKYEPSGDQPQAIETLVDNIEGGEKAQILLGATGTGKTYTMSQVIAK
VNKPTLVIAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSVVSLRPGQEISRDQLLND
LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GDVEHLAIFPATHFMTNEEHMEEAIQKILAEMEEQVKQFEAEGKLIEAQRIRQRTEYDVE
MLREMGYTNGVENYSRYMDGRSEGEPPFTLLDFFPEDFLIMVDESHMTMGQIKGMYNGDR
SRKEMLVNYGFRLPSALDNRPLRREEFESHIHQIVYVSATPGDYELEQTDTVVEQIIRPT
GLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI
QTIGRAARNSEGHVIMYADKITESMQKAMDETARRRKIQMRYNEEHGIVPQTIKKEIRDL
ISISKATDTEVAEDTPDYSSMNKAERKDAIKKLQKQMHEAAEMLDFELAAQLRDMVLELK
AMD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgatagaatagaaaataatcattttaaattagtctcgaaatatgagccatctggt
gaccaaccacaggcaatcgagactttagttgataatattgaagggggagaaaaagctcag
attcttctcggagcaacaggtactggtaaaacttatacgatgagtcaagtcattgctaaa
gttaataaaccgacccttgttattgcacataataagaccctggctggtcagctttatggg
gaattcaaggaattcttcccagaaaatgcggttgagtactttgtatcttactatgactat
taccaacccgaagcttatgtgccatcaagtgacacctatattgaaaaagatagctcggtc
aatgatgaaattgacaagctacgccactcagcaacgtcatcacttcttgaacgaaatgat
gttattgtcgttgcatctgtatcatgtatttatggtttggggtcaccgaaagaatatgct
gatagtgttgtaagtcttcgtccaggtcaggaaatctcacgtgaccaattgttaaatgac
cttgttgacattcaatttgaacgaaatgacattgattttcaacgtggtcgctttcgtgtt
cgcggtgatgtggttgaaattttcccagccagccgagacgaacatgcctttcgtgtcgaa
ttcttcggtgatgaaattgatcgcattcgagaaatcgaaagtttgacaggcaaagtttta
ggcgatgttgagcatttggcgattttcccagcaacccacttcatgaccaatgaagaacac
atggaagaagccattcaaaaaattctagcagaaatggaagaacaagttaagcaattcgaa
gctgaaggcaaacttatcgaagcacagcgtattcgccaaaggacagaatatgatgtcgaa
atgcttcgtgagatgggctatacaaatggtgtcgaaaactattctcgttatatggatgga
cgttcagaaggtgagccaccatttactctacttgatttcttcccagaagactttttgatt
atggttgatgaaagtcatatgaccatgggacaaatcaagggaatgtacaatggtgaccgt
tcacgtaaggaaatgttggttaactatggcttccgcttgccaagtgcacttgataaccgt
ccgcttcgtcgtgaagagtttgaaagtcatattcaccaaattgtttacgtctcagcgaca
cctggtgattatgaactagaacaaaccgatactgtcgttgaacaaattattcgtccgaca
gggctacttgatcctgaagtggaagtacgtccgacgatggggcaaatggatgaccttctt
ggtgaaatcaacgctcgtgttgaaaaaggtgagcgtacctttatcacgacattaactaag
aaaatggcagaagatttgacagattacctcaaagaaatgggtgtcaaagtaaaatacatg
cactcagatatcaagactttggaacgtaccgagattattcgcgatttgcgtttaggtgtt
tttgatgttttgattgggattaatttgctgcgtgaagggattgacgtaccagaagttagc
ttggttgctattcttgatgcggataaagaaggatttctccgtaatgaacgtggtctgatt
caaaccattggtcgtgctgcgcgaaatagtgaaggtcatgttatcatgtacgcagataag
attacagaatcaatgcaaaaagccatggatgaaacagcgcgccgtcgtaagattcaaatg
cgttacaacgaagaacatggtattgtaccgcaaaccattaagaaagaaattcgcgatttg
atttctatttctaaagcgacagatactgaagtggctgaggatacgccagattactcaagt
atgaacaaggcagagcgcaaagatgctattaagaaattgcaaaaacaaatgcatgaagct
gctgaaatgcttgatttcgagctcgctgctcaactgcgtgatatggtattagagttgaaa
gctatggattag
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