Streptococcus infantarius subsp. infantarius: Sinf_1482
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Entry
Sinf_1482 CDS
T01765
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sif
Streptococcus infantarius subsp. infantarius
Pathway
sif03030
DNA replication
sif03430
Mismatch repair
sif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sinf_1482 (holB)
03430 Mismatch repair
Sinf_1482 (holB)
03440 Homologous recombination
Sinf_1482 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sif03032
]
Sinf_1482 (holB)
03400 DNA repair and recombination proteins [BR:
sif03400
]
Sinf_1482 (holB)
Enzymes [BR:
sif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sinf_1482 (holB)
DNA replication proteins [BR:
sif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sinf_1482 (holB)
DNA repair and recombination proteins [BR:
sif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sinf_1482 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AEZ62789
LinkDB
All DBs
Position
complement(1506732..1507607)
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AA seq
291 aa
AA seq
DB search
MDLECLQPQLFKDFNQILKSDRMNHAYLFSGDFASFDFALYLAKSRFCENLQEGRPCGKC
RECQLIEDNDFSDVKIVKPTGQIIKTDTIRQMMRDFSRSGFEGKSQVFIIQDCEKMHINA
ANSLLKFIEEPQSSSYMILLTSDESKVLPTIKSRTQVFRFPKNKKLLVEQAEKAGILKTQ
ADILAELAKTPAHLDELMADKKVLELLQTCERFISILFKDKATAYLETGRLVQAAPEKSE
QELVFQLLPLFLAKQFNQKESLTYLEKSYKAQQMWRSNVSFQNVLEYMVIS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatttagagtgcttgcaaccccaactttttaaagactttaatcagattttaaaatca
gataggatgaaccacgcctatcttttttcaggggattttgccagttttgattttgcgctc
tatcttgctaaaagtcgtttttgtgagaacttgcaagaaggaagaccttgtggaaaatgt
cgtgaatgtcaattgattgaggataatgatttttcagatgtaaaaatcgtcaagccaaca
ggacaaatcattaaaacagataccattcgtcaaatgatgcgtgatttttcacgttcagga
tttgaaggaaaatcacaggttttcatcattcaagattgtgaaaagatgcatatcaatgct
gctaacagccttttgaaattcatcgaagaaccacaaagctcatcttacatgattttgctt
actagcgatgaaagcaaggtccttccaactattaagagccgaacacaagtttttcgtttt
ccaaaaaataagaagcttttagttgaacaagctgaaaaagctggcattctaaaaactcag
gccgatatcttagcagagttagctaaaacaccagctcacttagatgagttgatggctgat
aagaaggttttagagctccttcagacctgtgaacgctttatctcaatactatttaaagat
aaggcgacagcttatctggaaacaggtcgtttggttcaggcggcacctgaaaagtctgag
caagaactagtttttcaactgctccctttgttcttagcaaagcagtttaatcaaaaagag
agtctaacttatttagagaaaagttataaggcacagcaaatgtggagaagtaatgttagc
tttcaaaatgtgctagaatatatggtgatctcatga
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