Simplicispira suum: C6571_02230
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Entry
C6571_02230 CDS
T05361
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
simp
Simplicispira suum
Pathway
simp03410
Base excision repair
simp03430
Mismatch repair
simp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6571_02230 (recJ)
03430 Mismatch repair
C6571_02230 (recJ)
03440 Homologous recombination
C6571_02230 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
simp03400
]
C6571_02230 (recJ)
DNA repair and recombination proteins [BR:
simp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C6571_02230 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C6571_02230 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C6571_02230 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AVO40253
UniProt:
A0A2S0MX25
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All DBs
Position
469118..470827
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AA seq
569 aa
AA seq
DB search
MNIVARQVPPRAAWALEQAGVHPLLARLYAARGVLSHDELDDGLSRLLPPAGLKGITDAA
RLLADAIAAQQRICIVADYDCDGATACAVALRGLRLLGALHVDYLVPDRVVDGYGLTASI
ARRVKERGTDLLVTVDNGIASVDGVAEAKALGLAVLVTDHHLPGEQLPTADAIVNPNQPG
CSFESKAIAGVGVMFYVLLALRSELRARGAFDKATQPRLEPLLPLVALGTVADVVRLDAN
NRRLVAQGLKRIRAGHAPAGIAALFSAAGRRMDAATSFDFGFALGPRINAAGRLSDMSLG
IECLLTDDAGHAARLAAQLDAINRERREIEGGMREQALLMAENLFAEGEEPPPAVSVFDP
DFHEGVVGIVASRIKDKLHRPTFVFANSGAPGAEGQLKGSGRSIAGFHLRDALDLVAKRH
PGVLLKFGGHAMAAGCTLAAGRFAVFEQALAQVAREWLDAAALTRRIDTDGTLASEYCRA
DLVDTLHREVWGQGFAPPTFSEEVEVLSQRLVGEKHLSLKLRHQGRPVDGIWFGHTDPLP
GRVLLAFRLDVNEWKGERRVQFLVEGAQL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgtagcaaggcaagtgccgccacgcgccgcctgggcgctagagcaggcgggg
gtgcacccgctgctggcccgcctgtacgcggcgcgcggcgtgctcagccacgacgagctg
gacgacggcctctcgcgcctgctgccgcccgccggcctcaagggcatcaccgacgccgcc
cggctgctggccgacgccatcgccgcgcagcagcgcatctgcatcgtcgccgactacgac
tgcgacggcgccaccgcctgcgccgtggcgctgcgcggcctgcgcctgctgggagcactg
cacgtcgactacctggtacccgaccgcgtggtggacggctacggcctgaccgcgtccatc
gcccgtcgcgtgaaagagcgcggtacggacctgctcgtcaccgtggacaacggcattgcc
agcgtggacggcgtggccgaggccaaggcgctggggctggcggtgctggtcactgaccac
cacctgccgggcgagcagttgcccaccgccgacgccatcgtcaaccccaaccagcccggc
tgcagcttcgagagcaaggcgattgcgggggtcggcgtgatgttttacgtactgctggcg
ctgcgcagcgaattgcgcgcacgcggcgcgttcgacaaggccacgcagccgaggttggag
cccctgctgccgctggtcgccctgggcaccgtggccgacgtggtgcggctggacgccaac
aaccgccgtctggtcgcgcaagggctcaaacgcatccgcgctggccacgcacccgcaggg
attgccgcgctgttttccgcagccggccgccggatggacgcggccaccagctttgacttt
ggctttgccctggggccgcgcatcaatgcggccgggcgcctgtcggatatgtcgctgggc
atcgaatgcctgctgaccgacgacgcgggccacgccgcgcggctggccgcccagctcgac
gccatcaaccgcgagcgccgcgaaatcgagggcggcatgcgcgagcaagcgctgctgatg
gccgaaaacctgtttgcggaaggggaggaaccgccacccgccgtcagcgtgtttgacccc
gatttccacgagggcgtggtcggcatcgtcgcttcacgcatcaaggacaagctgcaccgc
cctacctttgtgttcgccaacagtggcgcgccgggtgctgagggccagctcaagggttcg
ggccgctcgattgccggcttccacctacgcgacgcgctggacctggtcgccaagcgccac
cctggcgtgctgctcaagttcggaggccacgccatggcggcgggctgcacgctggcggct
ggccggttcgcggtgttcgagcaggcgctggcgcaggtggcgcgcgaatggctggacgcc
gccgcgctcacgcgccgcatcgacaccgacggcacgctggcgagcgaatactgccgcgcc
gacctggtggacacgctgcaccgcgaggtctggggccagggctttgccccgcccaccttc
agcgaagaggtcgaggtgctgagccagcgcctggtgggcgaaaagcacctgtcgctcaag
ctgcggcaccagggccggccggtggacggcatctggtttggccacaccgacccgctgccg
ggccgggtgctgctggcgtttcggctcgacgtcaacgagtggaaaggcgagcggcgcgtg
cagtttctggtggagggcgcccagctttaa
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