KEGG   Simplicispira suum: C6571_17980
Entry
C6571_17980       CDS       T05361                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
simp  Simplicispira suum
Pathway
simp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:simp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C6571_17980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:simp03019]
    C6571_17980
Enzymes [BR:simp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     C6571_17980
Messenger RNA biogenesis [BR:simp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     C6571_17980
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 ERCC3_RAD25_C DUF594
Other DBs
NCBI-ProteinID: AVO42937
UniProt: A0A2S0N4J2
LinkDB
Position
3888026..3889294
AA seq 422 aa
MPFSALGLLSTLAQAAQAKGYATPTQVQTDMLPAVLQGRDVLAQAPTGSGKTAAFALPLL
QRLAQAPHVQPRPVHALVLVPTRELAVQVAAVLRDFAVALPRRVEVALAFGGVSINPQMM
ALRGGADVVVATPGRLLDLVEHNALRLDQVQTLVLDEADRLLDLGFADELARVLALLPAA
RQNLLLSATFPGKVQALAQALLREPVRIRVDAPAETPDIVQRSIAVDAARRTQLLRHLLL
QEGWSRVLVFVATQYAAEHVAEKLYKAGIFATPFHGGLSQGARRQVLDEFKAERWQVVLT
TDLAARGLDIAQLPAVVNFDLPRSPSDYVHRIGRTGRAGEAGLALSFVTPEGEAHMRLIE
KRLGVQFERERLAGFEPSTEPATSSANADAGAGGIKGKRPSKKDKLRAAGLLPPLDRSPG
GT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgccattttctgcccttgggctcttatccactctcgcgcaagcagcccaagccaaggga
tacgccaccccgacgcaggtacagaccgacatgctccccgccgtgctgcaagggcgcgac
gtgctggcccaggcacccacaggctcgggcaagacggctgccttcgccctgcccttgctc
cagcgcctggcgcaagcgccccatgtgcaaccgcgcccggtgcatgccttggtgctggta
cccacgcgcgagctggcggtgcaggtggccgccgtgctgcgcgactttgccgttgccctg
ccccggcgcgttgaagttgcactggcctttggcggcgtctcgatcaacccacaaatgatg
gcgctgcgcggcggcgccgacgtcgtcgtggccacaccggggcgactgctggacctggtg
gaacacaacgccttgcgcctggaccaggtgcagaccctggtgctggacgaagccgaccgg
ctgctggacctgggctttgccgacgagttggcgcgcgtgctggcactgctgccggcggcg
cggcaaaacctgctgctctcggccacctttcccggcaaagtgcaggcgcttgcccaggcc
ttgctgcgcgagccggtacgcatccgggtggatgcacctgccgagacgccggacatcgtg
cagcgcagcatcgctgtggacgcagccaggcgcacgcagttgctgcgccatttgttgctg
caggaaggctggagccgggtgctggtattcgtggccacgcaatacgcggccgaacatgtg
gcagaaaagctctacaaggcgggcatttttgccactccgtttcacggcggcttgagccag
ggggcgcgccgccaggtgctcgatgaattcaaagccgagcgctggcaggtcgtgctgacc
accgatctggccgcgcgcggcctcgacattgcgcaactgccggccgtcgtcaacttcgat
ctgccgcgatcaccgtctgactatgtccaccgcattggccgcaccggacgcgcgggtgag
gccggcctggcgctgagctttgtcacgcccgagggcgaagcgcatatgcgcctgattgaa
aagcgcctgggcgtccagttcgagcgcgagcgactggccggatttgagcccagcacggag
ccggccacgtccagcgccaacgccgatgcgggcgccggcggcatcaagggcaaacgcccg
agcaaaaaagacaagctgcgtgcagcaggcctgctgccgccgctggatcgctcgccgggc
ggcacctga

DBGET integrated database retrieval system