Simplicispira suum: C6571_17980
Help
Entry
C6571_17980 CDS
T05361
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
simp
Simplicispira suum
Pathway
simp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6571_17980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
simp03019
]
C6571_17980
Enzymes [BR:
simp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C6571_17980
Messenger RNA biogenesis [BR:
simp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C6571_17980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
DUF594
Motif
Other DBs
NCBI-ProteinID:
AVO42937
UniProt:
A0A2S0N4J2
LinkDB
All DBs
Position
3888026..3889294
Genome browser
AA seq
422 aa
AA seq
DB search
MPFSALGLLSTLAQAAQAKGYATPTQVQTDMLPAVLQGRDVLAQAPTGSGKTAAFALPLL
QRLAQAPHVQPRPVHALVLVPTRELAVQVAAVLRDFAVALPRRVEVALAFGGVSINPQMM
ALRGGADVVVATPGRLLDLVEHNALRLDQVQTLVLDEADRLLDLGFADELARVLALLPAA
RQNLLLSATFPGKVQALAQALLREPVRIRVDAPAETPDIVQRSIAVDAARRTQLLRHLLL
QEGWSRVLVFVATQYAAEHVAEKLYKAGIFATPFHGGLSQGARRQVLDEFKAERWQVVLT
TDLAARGLDIAQLPAVVNFDLPRSPSDYVHRIGRTGRAGEAGLALSFVTPEGEAHMRLIE
KRLGVQFERERLAGFEPSTEPATSSANADAGAGGIKGKRPSKKDKLRAAGLLPPLDRSPG
GT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgccattttctgcccttgggctcttatccactctcgcgcaagcagcccaagccaaggga
tacgccaccccgacgcaggtacagaccgacatgctccccgccgtgctgcaagggcgcgac
gtgctggcccaggcacccacaggctcgggcaagacggctgccttcgccctgcccttgctc
cagcgcctggcgcaagcgccccatgtgcaaccgcgcccggtgcatgccttggtgctggta
cccacgcgcgagctggcggtgcaggtggccgccgtgctgcgcgactttgccgttgccctg
ccccggcgcgttgaagttgcactggcctttggcggcgtctcgatcaacccacaaatgatg
gcgctgcgcggcggcgccgacgtcgtcgtggccacaccggggcgactgctggacctggtg
gaacacaacgccttgcgcctggaccaggtgcagaccctggtgctggacgaagccgaccgg
ctgctggacctgggctttgccgacgagttggcgcgcgtgctggcactgctgccggcggcg
cggcaaaacctgctgctctcggccacctttcccggcaaagtgcaggcgcttgcccaggcc
ttgctgcgcgagccggtacgcatccgggtggatgcacctgccgagacgccggacatcgtg
cagcgcagcatcgctgtggacgcagccaggcgcacgcagttgctgcgccatttgttgctg
caggaaggctggagccgggtgctggtattcgtggccacgcaatacgcggccgaacatgtg
gcagaaaagctctacaaggcgggcatttttgccactccgtttcacggcggcttgagccag
ggggcgcgccgccaggtgctcgatgaattcaaagccgagcgctggcaggtcgtgctgacc
accgatctggccgcgcgcggcctcgacattgcgcaactgccggccgtcgtcaacttcgat
ctgccgcgatcaccgtctgactatgtccaccgcattggccgcaccggacgcgcgggtgag
gccggcctggcgctgagctttgtcacgcccgagggcgaagcgcatatgcgcctgattgaa
aagcgcctgggcgtccagttcgagcgcgagcgactggccggatttgagcccagcacggag
ccggccacgtccagcgccaacgccgatgcgggcgccggcggcatcaagggcaaacgcccg
agcaaaaaagacaagctgcgtgcagcaggcctgctgccgccgctggatcgctcgccgggc
ggcacctga
DBGET
integrated database retrieval system