Sphingobium indicum B90A: SIDU_01170
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Entry
SIDU_01170 CDS
T04604
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sinb03029
]
SIDU_01170
Enzymes [BR:
sinb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SIDU_01170
Mitochondrial biogenesis [BR:
sinb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SIDU_01170
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
APL93248
UniProt:
A0A1L5BK69
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Position
complement(229860..232535)
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AA seq
891 aa
AA seq
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MPDIAETMALFARSPVTAVLGPTNTGKTHLAVERMCGHSSGMMGFPLRLLAREVYDRVVG
MKGPAQVALITGEEKIVPPGARYFLCTAESMPIGGGREPAQEGLKDYAFVALDEAQLGAD
PERGHIFTDRLLRARGREETMILGSASIGRLVKALVPDAEIIGRPRFSTLSYAGAKKLSR
LPKRSAIVAFSAEEVYAVAEMLRRFRGGAAVVMGALSPRTRNAQVQMFLNGEVDYLVATD
AIGMGLNLDVAHVAFASLRKFDGRRTRRLTVAEMAQIAGRAGRHHKDGTFGSLGHEDGDA
AFTPEEIEAIEAHRFPPVEQLFWRDGTPRTDRLDHLLSDLEQKPERPELRPAPEAVDLAV
LKRLADDPVVIERARGKKQVERLWAACGLPDFQKLGAEHHARAVSRIWRFLSEGTGHIPR
DWFAQQIARLDSVQGDIDTLSGRIAAARTWSYIAHRADWLAHPAEMAERTRALEEKLSDA
LHAALTQRFVDRRTTVLLRDMGQSAANLPVEMEPDGTVCVDGETIGRLDGFRFSVDPATR
HQDRKMLLAAAERRLGRILRVKADELLGAPDTDFALTDEAGQAPGISWQGNPVASLHGGS
ALLAPEIRLDRALLALGQDVQKQVATRLATWFDAQKEKHLLPLTKMVASSADPEVPAVVR
AVFAQLADAGGVIARTDLDSALGHLDKDQRHLLRRAGIDIGVLDIYHPGLLKPGSARWRA
ALLAARLGKPCLPLPGPGLTLIPAGEKFDQMGARIAGFRGFGDQMLRIDMAERMARTAHE
AIAKNEAFTAQSPQIVSLGLSEEAFLQLMRLAGFRPVEAPEEGGPNWVFRGRQKPRPHQQ
QRGDKRGAPAAGKPQGKPRGDRPPRPAASSGPAPTGNHAFAGLAELLGRNG
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacatagcggaaaccatggccctattcgcccgctcgcccgtcaccgccgtcctg
ggccccaccaacaccggcaagacccatctggcggtcgaacgcatgtgcggccacagttcc
ggcatgatgggctttccgctgcgcctgctggcgcgggaggtctatgaccgggtggtcggc
atgaagggcccggcgcaggtcgccctcatcaccggcgaggaaaagatcgtgccccccggc
gctcgctatttcctctgcacggcggaatccatgccaatcggcgggggccgcgaacccgcg
caggagggcctgaaggattacgccttcgtggccctcgacgaagcccaactcggcgccgat
ccggagcgcggccatatcttcaccgaccgcctgctgcgggcgaggggccgcgaggaaacg
atgatcctcggctcggccagcatcggccgcctggtcaaggcgctggtccccgatgcggag
atcatcggccgcccccgcttctccaccctcagctatgcgggcgcgaagaaactctcccgc
ctgcccaagcggtccgccatcgtcgccttctccgccgaagaggtttacgcggtagccgaa
atgctccgccgcttccggggcggcgctgcggtggtgatgggcgcgctgtccccccgcacc
cgcaacgcgcaggtgcagatgttcctgaacggggaggtcgactatctggtcgccaccgac
gccatcggcatggggctgaacctggacgtcgcccatgtcgccttcgcctccctgcgcaag
ttcgacggccgccgcacccgccgcctgaccgtcgcggaaatggcgcagatcgcggggcgc
gccgggcgccaccacaaggacggcaccttcggcagcctgggccatgaagatggcgacgcc
gccttcacccccgaagagatagaggccatcgaggcccatcgcttccccccggtggaacag
cttttctggcgcgacggcacgccgcgcaccgaccggctcgaccacctgctctccgacctg
gaacagaagcccgaacgccccgaactgcgccccgcccccgaagcggtggacctggccgtt
ctcaagcgcctggccgacgaccccgtcgtcatcgaacgcgccagggggaagaaacaggtc
gaacgcctctgggccgcctgcggcctgcccgatttccagaagctgggcgcggaacatcat
gcccgcgccgtcagccgcatctggcgcttcctgtccgaagggacgggccacatcccccgc
gactggttcgcgcagcagatcgcccgactcgattcggtgcagggcgacatcgacacgctt
tcgggccgcatcgcggcggcgcgcacatggtcctacatcgcccatcgcgccgactggctc
gcccatccggcggaaatggccgaacgcacccgcgccctcgaagaaaagctgtccgacgcg
ctccacgccgcgctgacgcagcgtttcgtggaccggcgcaccaccgttctgctaagggac
atgggccagagcgcggccaacctgccggtcgaaatggagccggacgggacagtctgcgtc
gatggcgagacgattgggcgacttgacggatttcgtttctcggtcgatcccgctacccgg
catcaggacaggaagatgctgctggcggccgctgaacggcgccttggaaggatattgcga
gtgaaggctgacgaattactgggcgcgcccgatactgatttcgcgctcacggacgaagcg
ggtcaggcccccggcataagctggcagggcaatccggtcgcgagcctgcacggcggctcc
gcgctgctggcccccgaaatccggctggaccgcgccctccttgccctcggtcaggacgtg
cagaagcaggtcgcgacccgcctcgccacatggttcgacgcgcagaaggaaaagcatctc
cttcccctcaccaagatggtcgcgagcagcgccgaccccgaagtccccgccgtggtccgc
gccgtcttcgcgcagcttgccgatgcgggcggcgtgatcgcgcgcaccgacctcgattcg
gcgctcggccatctcgacaaggaccagcggcacctgctgcgccgcgcaggcatcgatatc
ggcgtcctcgacatctaccatcccggcctgctcaagcccggctccgcccgctggcgcgcc
gccctgctggctgcccgcctgggcaagccctgcctgccgctgcccggccccggcctcacc
ctgatcccggcgggggaaaagttcgatcagatgggcgcccgcatcgccggtttccggggt
ttcggcgaccagatgctgcgcatcgacatggccgaacgcatggcccgcaccgcgcatgaa
gccatcgccaagaacgaagccttcaccgcgcaaagcccgcagatcgtctcgctcggcctg
tcggaagaagccttcctgcaactgatgcgcctcgccggtttccgcccggtggaagcgccc
gaagagggcggccccaactgggtcttccgcggccgccagaagccccgcccccaccagcag
cagcgcggcgacaagcgcggcgccccggcggcgggcaagccccagggcaagccgcgcggc
gaccgcccgccccgccccgccgcctcgtccggcccggcgcccaccggcaaccacgccttc
gcgggcttggccgaactgctgggccgcaatggctga
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