Stenotrophomonas indicatrix: DAIF1_17830
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Entry
DAIF1_17830 CDS
T07128
Symbol
oprB_1
Name
(GenBank) porin B
KO
K07267
porin
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinc02000
]
DAIF1_17830 (oprB_1)
Transporters [BR:
sinc02000
]
Other transporters
Pores ion channels [TC:
1
]
DAIF1_17830 (oprB_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
QBR44219
LinkDB
All DBs
Position
1928706..1929995
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AA seq
429 aa
AA seq
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MNPAKPVSLGLLAALLLPAVASAQSSNRYEGKTLTGDWGGSRTDLFERGVAFRGDYVGEA
MGVVDGGYGETGARYAQQVRVGVDLDMGKLAGWDGGAFHFTLNDRRGRSTSVDFVGNRFP
IQEAYGGQYTRLTELSYDQTFNAGRSYYKLGYYAMGNQFGLHSLLTHFVNAAFCAHPLAM
SGNSGWYNYPMARWGGEFAQQISPAVNVRTGWFQVNPNLGGNIERNAFRPFVSGTTGSLF
PVEVTWTPAKGSRYAGVYKFGGYYDTSRVDKRGLDTSPTTGRHGAYVLAEQRLTQESADP
SRGLTAFAQYMVSDTDTAQIKRWYALGGVYQGIGARAQDSIALGYVGADINDRLVDARRA
TLAAGGVPTDSPLYNLSQAEELFELSYSFQVNPWLMIRPDVQYIVNPGTFNYSGTDNAWA
VGVQAKVTF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgcgaaacctgtttccctgggcctgctggccgccctgctgctgccagccgtg
gccagcgcgcagtccagcaaccgctacgaaggcaagacgcttaccggcgactggggcggt
agccgcaccgatctgttcgagcgcggcgttgccttccgcggcgactacgtgggcgaggcc
atgggcgtggtcgatggtggctacggcgaaaccggcgcgcgctatgcgcagcaggtgcgg
gtgggcgtggacctggacatgggcaagctggccggctgggacggcggtgcgttccacttc
accctcaacgatcgtcgtggccgcagcacctcggtggacttcgtcggcaaccgcttcccg
atccaggaggcgtatggcggccagtacacgcggctgaccgagctgagctacgaccagacc
ttcaatgcgggccggtcgtactacaagctggggtactacgcgatgggcaaccagttcggc
ctgcacagcctgctgacccacttcgtcaacgccgcattctgcgcccacccgctggcgatg
tccggcaacagcggctggtacaactatccgatggcacgctggggcggtgagttcgcccag
cagatcagcccggcggtgaacgtgcgcacgggttggttccaggtcaacccgaacctgggc
ggcaacatcgaacgcaacgcattccgtccgttcgtttcgggcaccaccggctcgctgttt
ccggtggaggtgacctggacgccggccaagggcagccgctacgccggcgtctacaagttc
ggtggctactacgacacgtcgcgcgtggacaagcgcggcctcgatacctcgccgaccacc
gggcgccacggcgcctacgtgctggccgaacagcgtctgacccaggaatcggccgacccg
agccgcggcctgaccgccttcgcgcagtacatggtgtccgacaccgataccgcgcagatc
aagcgctggtacgcgctgggcggcgtctaccagggcatcggcgcccgtgcgcaggacagc
atcgcgctgggctacgtcggcgctgacatcaatgaccgcctggtcgatgcgcggcgcgcc
acgttggccgccgggggcgtgcccaccgattcgccgctgtacaacctcagccaggccgag
gagctgttcgagctgtcctacagcttccaggtgaacccctggctgatgatccgcccggac
gtgcagtacatcgtcaacccgggcacgttcaattacagcggtaccgacaacgcctgggcc
gtgggtgtccaggccaaggtgaccttctga
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