Stenotrophomonas indicatrix: DAIF1_24050
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Entry
DAIF1_24050 CDS
T07128
Name
(GenBank) autotransporter beta-domain protein
Organism
sinc
Stenotrophomonas indicatrix
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
SprB
Cadherin_5
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
QBR44839
LinkDB
All DBs
Position
2636914..2641821
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AA seq
1635 aa
AA seq
DB search
MSVANSGSQTININGCHGGFGISAGTAATPHGSRTVGVQSGANLPLTYTHNGDSATSDTF
VIQDDSNGDITVTVTIAPASAITLAASPAVNLTVGVPFSTSLSASGGTGPYTYSLDTGSI
PPGLSLSGNTISGTPTQRGAYAFTIRATDSASASGVRAFSGSATNPTLTIAPSSPSAAQN
LPYSVTFTASGGVPGYTFAFENGTLPPGLTLSGATLSGTPTTQGSYTFGIRVTDSSSGTG
SYAEVETVTLQVIPPPTILVNPFTVPGATVGAGYSQTLSGSGGTAPYTFAITAGSLPAGL
SLNTSTGALAGTPTAAGTFNFTVTATDANTFTGSRAYSLVVALPVIVIAPTTLPDGTVAA
AYSQSVSASGGIAPYTYAITAGALPTGLTLGGTGGITGTPTAGGTFNFTVTATSNSTGTG
APHTGSRAYALVIAPPTITLPASTLANGTQGVAYSAMLNPASGGTGAYSYAVTAGALPPG
IVLNASSGALSGTPTSAGTFNFAVTATDSSTGTGPYSSAPRGYTLQIINTPPVANPLSAS
VAYNSSANPITLNISGGVPSSVAVGTAPLHGSANASGTSITYQPTAGYAGPDSFTYTATN
TAGTSAPATVSVTVGNPAITVTASGPMSAQVGASYSQTFTWNGGTAPYSGFTVTGLPAGL
SVGGTTATSVTVSGTVSAAGSFSLVATATDSSTGTGPFTTGQGFTLTVGAPTLSMTPAPG
NLPMNYGTATTINFASSGGTAPYSYALVSGSLPVGVSFNSTGLLSGTPTVPGNYNISVRT
TDSSTGAGAPFALQQNYTIVVATPAIAIDPPSLPNGSAGVAYNAQLSSSGGLAPYSYSLL
SGALPVGVSFTSAGTLSGIPRSDGNFSITLGATDSNGQTASRVYTFTIAPATVVIAPATL
PGGAVGTAYSQNLSSSGGIAPYTYAIDSGALPPGIAFSSAGVFSGTPTTAGSYAAVVRST
DDAGYTSIQSYTLVIANAVPVTVDDSATTPSQQPVTIPVTANDGGVITSIAVASAPAHGT
ATVNGVTVVYTPTGTYFGADSFTYTATGPGGTSATATVSITVNALPVPAGQPRAAIPAVA
GQPLTIDTTVGATGGPFTGVTLVTQPATGTTTVTGTTITYTPLATASGTASIVYTLNNAY
GASAPITATITINQVPVAISRRVSANAGVAAVVELTTDATGGPFTAATLVSLSPSTAGTA
TIAPSGSGASAGYRLTFTPAATFAGTATATFTLSNAFATSAPATIDFDVIGRPDPTLDAE
VMGLLGAQTASTRRFATAQIGNFQRRMEGLHGAGRGTRFENGLSFGVDRDRRCQDEVRRM
PGGDCRQVTALDESVLRDDVAVAPAAGDRGTRRGDGDNGALTLWTGGSINSGDRDGRSGS
AGFDFQTSGISAGADTRVNQAFAFGGGIGYGRDTTDVGHNDTRSHGESYTLAAYGSYHPG
QYFFVDGLLGYQLLSFDSRRYVTANGAMVQGDRDGKQWFASLSVGGDYQRDRLSVSPYAR
LDLARATLNGYTERGDAIHALRYEDQDVDTTTASLGVHMDYRYPVRFGTLSPQLRLEYQH
DFQDASPVTMGYADLPGGPFYRSEIDGLKRNRFVFGLGAVLQTERDLSLRIEYRGLFGSS
EDTDHGLQLNLEKKY
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgccaacagtggctcgcagaccatcaacatcaacggttgccacggcggcttc
ggcatctctgcgggcaccgcggcgaccccgcacggcagccgcaccgtcggcgtgcagtcg
ggtgccaacctgccgctgacgtacacccacaacggcgacagcgcgaccagcgataccttc
gtcatccaggacgactcgaacggtgacatcaccgtcaccgtcaccatcgctccggcatca
gccatcaccctcgccgcctcgcctgcggtcaacctgacggttggcgtgcctttcagcacc
agcctcagtgccagcggcggcaccggaccgtacacctacagcctggacaccggctccatt
ccgccggggctgagcctgagcggaaacaccatcagcggtacacccacccagcgcggcgcc
tacgccttcaccatccgcgccaccgacagcgcctctgccagcggcgtgcgcgccttcagc
ggttcggccacgaacccgacccttaccatcgcgccgtcgtctccgtctgccgcgcagaat
cttccctactcggtgacctttactgccagcggtggcgtgcccggctacacgttcgcgttt
gaaaacggcacgctgccgcctggcttgaccctgagcggcgcgaccctgagcggcacgccc
accacccagggcagctacaccttcggcatccgcgtcaccgacagcagcagcggcaccggc
agctacgccgaggtcgagacggtgaccctgcaggtgattccgccgccgaccatcctggtc
aacccgttcaccgtcccgggtgcaaccgttggcgcgggctacagccagaccctcagcggc
agcggtggtaccgcgccctacaccttcgccatcaccgcaggctcgctgcccgccgggttg
agcctcaacaccagtactggcgcactggccggcacgccgaccgcagccggcaccttcaac
ttcaccgtgactgcgacggacgccaatacgttcaccggttcacgcgcctattccctggtg
gtggcactgccggtgatcgtgatcgcgccgacgacacttcccgacggcacggtcgcggcg
gcatacagccagtctgtcagtgccagcggcggcattgcgccgtacacctatgcgatcacg
gcaggcgcgctgcccaccggcctgaccctcggcggcaccggcggcatcaccggcacaccg
acggccggcggcaccttcaacttcaccgtgaccgccaccagcaacagtactggcaccggc
gcaccgcacaccggctcccgggcctatgcgctggtgatcgctccgccgaccatcactctg
ccggcaagcacgctggccaacggcacccagggtgtggcctatagcgctatgctgaatccg
gcaagcggcggcacgggagcgtacagctatgcagtgaccgccggggcgctgccaccgggc
atcgtgctgaacgcttcctcgggcgccctgtcgggtacacctacatccgcgggtactttc
aatttcgccgtgaccgcaaccgacagcagcaccggcaccgggccctacagttccgcgccg
cgcggctatacgctgcagatcatcaacaccccgcctgtcgccaatccgctgtcggcgagc
gtggcctacaacagcagcgccaatccgatcacgctgaacatctctggcggcgtgccgtcc
tcggtggccgtcggtaccgcgccgcttcatggcagtgcgaacgccagcggcacctccatt
acctaccagcccaccgcgggttacgcgggcccggacagctttacctacaccgcaacaaac
accgccggcacctcggcgcccgccacggtcagtgtgactgtcggcaacccagccatcacc
gtgacggcgagcggcccgatgagcgcacaggtcggcgccagctacagccagacgttcacc
tggaatggcggcactgcaccctatagcggcttcactgtcaccggcctgccagcaggcctc
agcgttggtggcactaccgccaccagcgtgaccgtaagcggcacggtgagcgcggcgggc
agcttcagcctcgtcgccactgccaccgacagcagcaccggcaccggtccgttcaccacc
ggccagggcttcacgctgaccgttggcgcgccgaccctgagcatgaccccggcgccgggc
aacctgccgatgaactacggcacggccaccaccatcaactttgccagcagcggcggcacc
gcgccgtacagctacgcactggtctccggctcgttgccggtgggcgtgagcttcaactcc
accggtctgctcagcggtacgccgaccgtaccgggcaactacaacatctccgtgcgtacc
accgattccagcaccggcgcgggcgcgccgttcgcgctgcagcagaactacaccatcgtc
gttgccacgcctgcaatcgccatcgatccacccagcctgcccaacggcagcgcaggcgtg
gcctacaacgcacagttgagctccagcggcggccttgcgccgtacagctactctctgctc
agtggtgcgctgccggtcggcgtgtccttcacctctgcaggcaccctgtccggcatcccc
cgctcggatggcaacttcagcatcacgttgggtgccaccgattccaacggccagaccgcc
agccgcgtgtacaccttcactatcgccccggcaaccgtagtgatcgcaccggccaccctg
cccggcggcgcggtcggcacggcctattcgcagaacctgagcagcagcggcggcatcgcc
ccgtacacctatgcgatcgactccggcgccctgccccccggcattgccttcagttcggca
ggcgtgttcagtggtacgccgaccacggccggcagctatgccgcagtggtgcgctccacc
gacgacgccggctacaccagcatccagagctacaccctcgtcattgccaacgcggtgccg
gtgacggtggacgacagcgccaccacgccgtcgcagcaaccggtgacgattccggtgacg
gccaacgacggcggtgtgatcacctcgatcgccgtggccagcgcgccggcacatggcacc
gccacagtgaacggcgtgaccgttgtctacacgccgacgggcacctacttcggcgcggac
agcttcacctacaccgctaccggcccgggcggcacctcggccacggccacggtgtcgatc
accgtcaacgcgctgcccgtgcctgccggacagccgcgcgcggccatccctgccgtggcg
ggccaaccgctgaccatcgacaccacggtgggtgccaccggcggtccgttcaccggtgtg
accctggtgacgcagccggccaccggcaccacgaccgtgaccggtaccaccatcacttac
accccgctggccaccgcatcgggcacggcaagcatcgtctacaccttgaacaacgcctac
ggtgcttcggctccgatcaccgccacgatcaccatcaaccaggtgccggtggcgatctcg
cgccgggtcagtgcaaatgcgggtgttgcggcggtggtcgagctgacgacggatgcaacg
ggcggcccgttcactgcagccaccctggtgtcgctgtcgccgtccactgccggcactgcc
accatcgcaccgtccggcagtggtgccagcgcgggctatcgcctcacgttcaccccggcg
gccaccttcgccggtaccgccacggccaccttcaccctgagcaacgcgttcgcgacctcg
gcgccggcgacgatcgactttgatgtgatcggccgaccggacccgaccttggacgcggag
gtgatgggcctgctgggcgcgcagaccgcctccacccggcgcttcgccaccgcgcagatc
ggcaatttccagcgccgcatggaaggcctgcatggtgccggcagaggcacacgcttcgag
aatggcctgagcttcggcgtcgaccgcgatcgtcgctgccaggatgaggtacgacgcatg
cccggtggcgattgccgccaggtgaccgcgctggacgaatctgttctgagggacgacgtt
gctgtcgcgcccgccgctggggatcgcggcacacgtaggggtgatggagataacggtgcc
cttaccctgtggaccggcggctcgatcaacagcggtgatcgcgatggtcgctcgggcagc
gcgggcttcgacttccagaccagcggcatcagcgccggtgccgatacccgggtgaaccag
gcattcgccttcggcggtggtatcggctacggccgcgacacgaccgacgtcggtcacaac
gacacccgcagccacggcgaaagctacaccctggccgcgtacggcagctaccacccgggg
cagtacttcttcgttgatggcctgctgggttaccagttgctgtcattcgactcacgtcgc
tacgtgaccgccaatggcgcgatggtgcaaggcgaccgcgatggcaagcagtggttcgcc
tcgctgtcggtcggcggcgactaccagcgcgaccgcttgtcggtgagtccgtatgcgcgg
ctggacctggcccgtgcaacattgaacggctataccgaacgcggcgacgcgatccacgcc
ctgcgctacgaggaccaggatgtggacaccaccaccgccagcctgggcgtgcacatggac
tatcgctacccggtccgcttcggcacgctctcgccacagctgcggctcgaataccagcac
gatttccaggacgccagcccggtgacgatgggctacgccgatctgccgggcggcccgttc
taccgcagcgaaatcgatggactcaagcgcaaccggttcgttttcggtctgggggcggtg
ctgcagactgaacgcgacctcagcctgcggatcgagtaccgcggcctgttcggcagcagc
gaagacaccgaccatggtctgcagctgaacctggaaaagaagtactga
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