Stenotrophomonas indicatrix: DAIF1_27720
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Entry
DAIF1_27720 CDS
T07128
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinc03019
]
DAIF1_27720
03016 Transfer RNA biogenesis [BR:
sinc03016
]
DAIF1_27720
Enzymes [BR:
sinc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
DAIF1_27720
Messenger RNA biogenesis [BR:
sinc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DAIF1_27720
Transfer RNA biogenesis [BR:
sinc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DAIF1_27720
Prokaryotic type
DAIF1_27720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
QBR45198
LinkDB
All DBs
Position
3032803..3033261
Genome browser
AA seq
152 aa
AA seq
DB search
MRNPRLLITAIVLLLLGLVVNHFLQRPPPPQFAPDLQGTPAANAPALRSNSDSDSGLPGF
LPAEARQTIALIQRGGPFPHRQDGSTFGNREQQLPQRPRGYYREYTVDTPGAGNRGARRI
VTGGNPPDAWYYTDDHYESFRSFTVPASGERP
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacccccggctgttgatcactgccatcgtcctgctgctgctcggcctggtcgtc
aatcatttcctgcagcggccgccgccgccgcagttcgcgcccgacctgcagggcactccg
gcggccaacgcaccggcgctgcgcagcaacagcgacagcgacagcggcctgcccggcttc
cttccggccgaggcccgccagaccatcgcgctgatccagcgcggcggcccgttcccgcat
cggcaggacggcagcaccttcggcaaccgcgaacaacagctgccacagcgcccgcgtggc
tactaccgcgagtacaccgtcgacacgcccggtgcaggcaaccgcggcgcgcggcgcatc
gtcaccggtggcaacccgcccgatgcctggtactacaccgatgatcactacgaatcgttc
cgcagcttcaccgtaccggcctccggagaacgcccatga
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