Sesamum indicum (sesame): 105158688
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Entry
105158688 CDS
T04135
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105158688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105158688
03400 DNA repair and recombination proteins [BR:
sind03400
]
105158688
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105158688
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
105158688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
HeH
Motif
Other DBs
NCBI-GeneID:
105158688
NCBI-ProteinID:
XP_011073828
UniProt:
A0A6I9T104
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Position
LG3:complement(18074066..18090729)
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AA seq
627 aa
AA seq
DB search
MDIDPDDVFRDDDDPEDEFHQERDATKEMLVYLVDASPKMFSTTFPSEDQKDVSHFQIAV
RSIAQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVYVFNVPEREDLDRPTARLIKEF
DRIEESFDKQIGSKYGILPGTRDNSLYNAFWAAQAILRKGSAKTADKRILLFTNEDDPFG
NMKGVTKMDMMRTTLQRAKDAQDLGILIELLPLSRPDEDFNMSTFYAELLGLEGNDLAEF
KALIGERFEDMKDQLRKRIFRKRKVRRINFIIAGGISIELNTYALVRPTNPGAITWLDSV
TNLPIKAERSFFCSDTGALLQEPPKLFQTYKNENIMFSANELSEIKRVSTGHLRLLGFKP
LSCLKDYHNLRPSTFVFPSDEEVIGSTCIFIALHRSMLRLKRFAVAFYGSSTHPQLVALV
AQDEIVSTSGQIEPPGMHMIYLPYSDDIRPVEELHTDTNPMAPRATEDQIKSASLLVKRV
DLKNFSVCQFANPALQRHYAVLQALALDEDEMPDTKDETLPDEEGLARPGIVKALEEFKL
SVYGENFEEENDLMNNEKTSEASKKRKAIAENATKEYANYDWLDLADNGKLKELTVVELK
YYLTRHNLPVTGKKEALISRILTHMGK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatcccgacgatgtttttcgcgacgacgacgacccggaggatgaattccac
caggagagagatgctacgaaggagatgttggtgtatttggtggatgcttcccccaaaatg
ttctccaccactttcccttcagaagatcagaaggatgtcagtcactttcaaattgctgtc
cgtagcattgcacagtccctgaagactcaaattatcaataggtcttatgatgaagttgct
atatgcttctttaatactagggaaaagaagaatttgcaggacctgaatggtgtatatgtt
tttaatgttcctgaacgagaggatttagatcgaccaacagctaggcttatcaaagaattt
gaccgcatagaagagtcatttgataaacaaattgggagtaaatatggcatcttgcctgga
actcgtgataattctctttacaatgctttttgggctgcacaagcaatattgcggaaaggg
tctgcaaaaacagctgataaaaggattctgttgtttacaaatgaagatgatccatttggg
aacatgaaaggagtgacaaaaatggatatgatgagaacaacattacaacgagccaaagat
gctcaagatcttggcatcttaattgaactccttcccttgagtagaccagatgaagacttc
aatatgtccactttctatgcggaattattgggactggaaggcaatgacctggctgagttt
aaggctttaataggggagagatttgaggatatgaaagatcagctaagaaagcgtattttc
agaaagcggaaagttcgaagaattaacttcatcattgctggtggcatatccattgaatta
aatacctatgctttagtccgtccaaccaatccaggggctatcacttggcttgattcagtc
actaatcttcctataaaggcagagagatcttttttctgttcagacactggtgctctgctg
caggagcctccaaaactttttcagacttacaagaatgagaatataatgttctcagccaat
gaactttccgaaatcaagagggtctctaccggacatcttcgtctcctaggtttcaagccg
ttgagttgcttgaaggattatcacaacttgaggccatcgacctttgttttcccaagtgat
gaggaagtgattggaagtacttgtattttcatagctcttcacagatcaatgttgcggctg
aagcgtttcgccgttgcgttttatgggagctcaactcatcctcagttggtggcattagtt
gcacaagatgagattgtcagcaccagtggtcagattgaaccacctggaatgcatatgata
tatcttccatattctgatgatatcagacctgttgaagagcttcacactgatacaaatccc
atggcacctcgagcaactgaagaccaaataaagagcgcctctttgttagtgaagcgtgtt
gatctaaaaaacttttcagtttgccaatttgcgaaccctgccttgcagagacattatgca
gtattgcaggctctggctttggatgaagatgaaatgcctgataccaaggatgaaaccctt
ccagatgaagaaggcttggcgagaccgggtattgtcaaagcattggaagagttcaagctt
tctgtctatggagaaaattttgaagaggagaatgacttgatgaacaatgaaaaaacaagt
gaagcctccaaaaaaaggaaagcaattgctgaaaatgcaaccaaggagtatgcaaactat
gactggttagatcttgcagacaatggaaagttgaaggagttgacggtggtggaacttaag
tactacctgaccagacacaacctgcccgttactgggaaaaaggaagctctgatcagccga
atcttaactcacatgggtaaatga
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