Sesamum indicum (sesame): 105159805
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Entry
105159805 CDS
T04135
Name
(RefSeq) uncharacterized protein LOC105159805
KO
K19022
AP-5 complex subunit beta-1
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105159805
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
105159805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
RIX1
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
105159805
NCBI-ProteinID:
XP_011075306
UniProt:
A0A6I9SWX9
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All DBs
Position
LG4:2355435..2361734
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AA seq
1122 aa
AA seq
DB search
MAGTSLKPLSPPEWESLIDDYNLGGAARLQRWTGGAPLFDLCLSSLLRKDFPLQLKLHIL
TFLEHHTLEDSPPPSSSLSRLLDALRSVIQSPNDPFSLKDQFLISTAAIFITSLLDNNDL
SSCAPLSGLVELLLTIINRPNHGLDRQTRGIACECLRQLELAFPCLLSEITPHLWSLCQS
ERTHVSQWYVLLLSTTIRNIVKLKPSDTIASISNATVPLIPFNFPQFLIDGVGADFVWKE
KEICYKELRRVVAFLLECPQYLTPYGLVEFMAAIIPVAEELELQASLLRVQFSWLLYTFE
PLLCHVFLGLYLKFLDSFEGQEFEVSSRILLMSKESQHHLVFRLLGLHWILGFFALIVGK
DDTRKRSILDMRLSFYPTIFDSLAMKALKLDLLAYCSSLLANPGDASGVKHVEADKEVYE
VKLFKDGLVSVSAFRWLPPWSTETAVAFRTFHKFLISGSPHSDAAGSSVGTLIESNIFYT
LQKMLVDSTLEFKGLVPVTVACIDRLLGCHKHRWLGEHLLKTLDKHLLPKLKIDYSLGSY
FPIFERISEIDKVSPSGLLNLLMRFMVFLVKKHGPDTGLKSWSHGSKILAICRTMLIHHP
SSSLCTGLSHLLESTCLYFPDLEVRDNARFYLRMLLCIPGKKLKHILNTGENLPGISPST
HPDSFFSLQSLQSFPDLKRSGSIASYIHIKRVMPLLVKQSWSLSLPNLGISADKPGFFEG
IRDNEPTSEERGSDISMNDDIISESEILQQKVPLRVMDAKISEIVTVLRRHFSFIPDYRH
MPGLKIKISCSLRFDSEPFVGIWEVNTSANVLDEVDKLPALYATVLKFASSAPYGPISSF
HVAFLLGSPPKNAKPLSQTDSLAIVPVENGHHVEEDDFMAPVSIELEPREPMPGLVDVFI
ETNTDNGQIICGQLHSVSVGIEDMFLRAILPDDIAEDDAPLYYVDLFNALWEACETSSST
GRETFVLKGGKGVAAISGTRSVKLIEVPATSLVQAVERHLAPFVVCVIGEPLVDMVKAGG
VIKDILWKDFSSDSSLDVTCSPTSSRGPLYLKYFGDEDEGEGQIPSSRKNIGYFHILIFL
PPRFHLLFQMELRDFSTLVRIRTDHWPCLAYVDDYLEALVLD
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggccggaacgtctctgaaacccctgtctccgccggaatgggagtcgctaatcgacgac
tacaacctaggcggcgccgcccgcctccaacgctggaccggcggtgctcctttattcgac
ctctgcctctcctccctcctccgtaaagattttcccctccaactcaaacttcatatcctc
actttcctcgagcatcacacgcttgaagattcgccgccgccatcgtcctctctgtcccgc
ctgctcgatgcccttcgctccgtcattcagtcccccaatgacccattttctctcaaagac
caattcctcatctccaccgccgccattttcatcacatcgctattggataacaatgattta
agcagctgcgctccactcagtggcctcgtcgagctcttgttgactattatcaatcgcccc
aatcacggcctcgatcggcaaacgcgcggaatcgcgtgtgagtgtttgcggcaattggaa
ctggctttcccttgtttgctttccgaaattactccccatttgtggtccttgtgccaaagc
gaacggacccatgtttcacagtggtatgttctgttattgtccacaaccatacgcaatatt
gtcaagctgaagccgagtgacactattgcgtctattagtaatgctacggtccctttaatt
ccgttcaatttcccgcagtttttgattgatggggttggtgcggatttcgtgtggaaggag
aaggagatttgttacaaggagctgcggagagttgttgcgtttttgctggagtgcccgcaa
tatttaactccatatggattggtggagtttatggctgctattattcctgtagctgaagag
ctagaacttcaggcttctctgctgagggtgcagttctcatggttgctgtacacgttcgaa
ccattgctttgtcatgttttcttgggactgtatttgaagtttttggattcttttgaagga
caagaatttgaggtatcttctcgcatattgttgatgtcgaaagaatcacaacaccatttg
gtttttaggttgttgggacttcactggatattaggcttctttgctttgatagttggtaag
gatgatacaagaaagagaagcatccttgacatgagattaagcttttatcctacaattttc
gattccctggctatgaaagccttgaagcttgacttgcttgcatattgctctagcttgctc
gctaatcctggagatgcaagtggtgtaaagcatgtggaggctgataaggaggtgtatgag
gtgaagctattcaaagatggccttgtttccgtgtcagctttcagatggctgcctccatgg
agcacagaaactgcagtggcatttcgcactttccataaatttctgattagcggatcaccg
cattctgatgctgctggttcttcagttggtactcttattgagtcaaacatcttttacacc
ttacagaaaatgctggtggactcgactttggaattcaagggattagttccagtaactgtt
gcatgcatagatcgcttgttgggatgccacaagcatcgctggttgggagagcatcttctc
aaaactctggataagcatctgcttcctaagctcaaaatagattatagcctgggatcttac
ttccccatatttgagagaatttctgaaattgataaagtttcacctagtgggctgttaaat
ctcctcatgagattcatggttttccttgtaaagaaacatggtcctgatacagggttgaaa
tcttggtcccatggcagtaaaattcttgccatttgtcgaacaatgctgatccaccacccc
agctctagcttatgcactggattatctcatcttcttgaatctacttgtctctattttcct
gatctggaggttcgagacaatgcgagattttacctgcgaatgcttctctgtataccggga
aaaaagctcaaacacatactgaacacgggggaaaatttacctgggatatctccatccact
catcccgactcattctttagtcttcagtctcttcaatctttccccgaccttaagaggtct
ggcagtatcgcttcttatatccatataaaacgtgtgatgcctttattggtgaagcagtca
tggtccctatctctgccaaatcttggcatcagtgctgacaaacctggattctttgagggc
atcagggataatgagccaacaagcgaggaaaggggctctgacataagtatgaatgacgat
attatctcagaaagtgaaatacttcaacaaaaagtgcctttgcgcgttatggatgcaaaa
atttcagagattgtgacggtactgagaaggcatttctcatttattcctgattatagacat
atgccgggcctcaagattaagatctcctgtagtttgagatttgactcggagccatttgtt
ggtatatgggaagtcaatacatcagctaatgtgttggatgaagtggacaaacttcctgca
ttatacgccacggttcttaaatttgcttcttctgcgccatatggacctatttcgtcattt
catgttgccttccttcttggctcaccacctaaaaatgctaaacctttgagccaaaccgat
tcattagctattgttccagtggagaatggtcaccatgtcgaagaagatgacttcatggct
cccgtatctatagaattggagccacgggaaccaatgcctggtctggttgacgtcttcatt
gaaactaatacagacaatggtcagataatctgcggacagcttcatagtgtctctgtggga
attgaggatatgtttctgagagctattcttccagatgatattgctgaagatgatgcacct
ctttattatgtggacctatttaatgcgttatgggaggcctgtgagacatcatctagcaca
ggtagagaaacctttgtcttgaaaggtggaaaaggggttgctgcaataagtgggactcgg
tctgtaaaactaattgaagttcccgcgacatctttggttcaagctgttgagcgtcatctt
gcgccttttgttgtttgtgttattggtgaaccacttgttgatatggtgaaagctgggggt
gtgatcaaggacatactgtggaaggatttcagttcagattcttcacttgatgtaacttgt
tcaccaactagttctagagggcccctttatctcaagtactttggcgatgaagatgaggga
gagggtcaaatcccaagtagtaggaaaaatattggttacttccacattttgatatttctt
ccaccaagattccatcttcttttccaaatggagcttcgagatttttcaactcttgttcgg
attagaactgatcattggccatgcttagcttatgttgatgactatttggaagctttagtt
ttggactga
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