Sesamum indicum (sesame): 105166143
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Entry
105166143 CDS
T04135
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sind03016
]
105166143
Enzymes [BR:
sind01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
105166143
Transfer RNA biogenesis [BR:
sind03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105166143
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Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
105166143
NCBI-ProteinID:
XP_011083688
UniProt:
A0A6I9TKN4
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Position
LG7:3830955..3835342
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AA seq
660 aa
AA seq
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MYPSLPPTRLTLLTLLSATATFYFLYKSRHRHSRLLTRLCQAVTGPGLRCGNPASYKRGK
LLFLSQTDTSKNLAQRLHALLTLNDLPFDLVDPKDYEPEDLCKESLVLIVASTWENGGAP
ENGVFLVNWLTESADDFRVGALVLKECKYAVFGVGSRSYGETYNAVARGVSVKLRKLGAS
ELVELGEGDVDEADLDEVFDLWSKKVVGVLKDKLGENGQHFENYGVECESEGEGEFSEED
DDEDAENGGDSAIVDLEDIAGKGPSRRSVVATKANGKVNGEVLNGEKEMVTPVLRANLEK
QGYKIIGSHSGVKLCRWTKSQLRGRGGCYKHSFYGIESHRCMETTPSLACANKCVFCWRH
HTNPVGKSWKWKMDDPLVIVDTAIELHTKMIRQMKGVPGVKAERLSEGLSPRHCALSLVG
EPIMYPEINALVDELHRRRISTFLVTNAQFPERIKMLKPITQLYVSVDAATKDSLKAIDR
PLFGDFWERFIDSLKSLREKQQRTVYRLTLVKGWNTEDVDAYSSLFDVGSPDFIEIKGVT
YCGSSATSKLTMENVPWHSDVKEFSEALAQKSNGMYEVACEHVHSCCVLLAKVDKFKVNG
QWYTWIDYDKFHDLVSAGEPFTSKDYMAPTPSWAVYGAEEGGFDPLQSRFRKERHHKSSR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtacccatcacttccccctacccgcctcactctcctcaccctcctctccgccacggcc
accttctacttcctgtacaaatcgcgccaccgccacagccgcctcctcacgcgcctctgc
caagccgtcacaggaccaggtttgcgatgcgggaaccctgcttcttataaaagagggaaa
cttttgttcctatcgcaaaccgacacttccaagaacctagcgcagcgtctccatgcgctc
ttaaccctcaacgatcttccctttgatcttgttgatcccaaggactatgagcctgaggat
ttatgtaaagaatctcttgttttgattgttgcttccacttgggaaaatggtggggcccct
gaaaatggagtctttttggtaaattggttaacggagagcgctgatgattttagggttggg
gccctggtgctgaaggaatgtaaatatgccgtttttggggtggggagcaggagttatggt
gaaacgtataatgctgtggccaggggtgtttcagtgaagttgcggaagctcggggcgagt
gagctggtggagttgggggagggggatgtggatgaggcggatttggatgaggtgtttgat
ctgtggagtaagaaggttgttggggttttgaaggataaattaggagagaatgggcagcat
tttgaaaattatggggttgagtgtgaaagtgaaggtgaaggtgagtttagtgaggaagac
gatgatgaggatgcagagaatggtggtgattcagccatcgttgatctcgaggacattgca
ggaaaaggtccttcaagaagatcagttgtggcaactaaggctaatggaaaagtaaatggt
gaggtattaaatggggagaaagaaatggtgacgccagtgttaagggcaaatttagagaag
caggggtataaaatcattggttctcacagtggggttaaactctgtagatggaccaagtcc
cagcttagagggcgtggaggttgttataagcactctttttatggcattgagagtcacagg
tgcatggaaaccaccccaagtttagcatgtgcaaataaatgtgtgttttgttggagacat
cacacaaatcctgtcggcaaaagctggaaatggaagatggatgatccattggtgatcgtt
gacactgccattgaactacatacaaagatgatacgtcagatgaaaggagttccaggggtg
aaggcagagcgtttatctgagggtctttctcctagacattgtgctttgtcacttgttggt
gaacctatcatgtatccggagatcaatgctctcgtagatgagctacaccgaaggcggatc
tcaacttttctcgtgacaaatgcacagttccctgaaagaattaagatgcttaaacctatc
acacagttgtatgtgagcgtagatgctgctacaaaggatagcttgaaggcaattgacaga
ccactctttggggacttttgggagagatttattgattctttaaaatctctgagggagaag
caacagcgaactgtgtatcgcttgacactggttaaaggatggaatacggaagatgtggat
gcctattctagcttatttgatgttggaagtcctgatttcattgaaatcaaaggggtgaca
tattgtggatcgtcagcaacttcaaagttaacgatggagaatgtaccctggcattctgat
gtaaaagagttttcagaagccttggctcaaaagagcaatggaatgtatgaggttgcttgt
gagcacgtgcactcatgttgtgttcttctggctaaagtggacaaatttaaagtcaatggc
caatggtatacgtggatagactatgacaagttccacgacctggtgtcggctggggaacct
tttaccagtaaggattacatggctcctacaccatcttgggcagtctatggagcagaagaa
ggcggcttcgatccactgcaatctcgttttaggaaagagcggcaccacaaatcgtcacgc
taa
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